Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0492 ATGGGTCTGAGAGACATAGGGGCTTCACTTCCTCCTGGGTTTCGTTTCTATCCGAGCGATGAGGAGCTGGTTTGTCATTACCTCTACAAGAAGATCACCAATGAGGAAATCCTCAAAGGCACTTTGGTCGAAATTGACTTGCATACATGCGAACCATGGCAGCTTCCAGAGGTGGCGAAGCTGAACACAAGCGAATGGTATTTCTTCAGCTTCCGGGACCGCAAATACGCAACAGGATTTCGGACGAATAGGGCGACGACATCTGGATATTGGAAAGCGACAGGGAAGGACAGGACAGTGCTGGACCCAATGACGCGCGAGGTTGTAGGGATGAGGAAGACGCTGGTGTTCTACAGGAACAGAGCCCCCAATGGTATGAAAACTGGTTGGATCATGCACGAATTCCGCTTGGAGACCCCACACATGCCCCCCAAGGAGGACTGGGTTTTGTGTAGAGTATTTCACAAAAGCAGAGCAGACACCAAACTCAGCCCACAGGAGATGTTCGAGACTGCACCTTCGTTTACTTTTCCTTCTTCGTCTCCAACCAATCAAACTGAACCCCCTGGCTTCACCACTTTCACCTCCATGCCAACTCATCATCATCATGATTACCAATACCAAAACCACAACAGTTCTCTAATGGACCTGCTTCAATTTTCTCGGGAAACAGACGCTGGTGCTGTCAGTCAAAGTATTCCAAAAGGAGATCATGGTGAATATGACGAAGGGTTCTTATGGGGCATGGACCTGGAAGAAAACAGCATCCACCACCACAATGACGACGTGGCATCAAACCTCGACGGAATGAGATTCGATGTTGATAATGATAGTATGGTTTTTTTATAA 849 0.4806 MGLRDIGASLPPGFRFYPSDEELVCHYLYKKITNEEILKGTLVEIDLHTCEPWQLPEVAKLNTSEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVLDPMTREVVGMRKTLVFYRNRAPNGMKTGWIMHEFRLETPHMPPKEDWVLCRVFHKSRADTKLSPQEMFETAPSFTFPSSSPTNQTEPPGFTTFTSMPTHHHHDYQYQNHNSSLMDLLQFSRETDAGAVSQSIPKGDHGEYDEGFLWGMDLEENSIHHHNDDVASNLDGMRFDVDNDSMVFL 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0492 282 Pfam No apical meristem (NAM) protein 11 137 IPR003441 GO:0003677|GO:0006355
Lele15g0492 282 ProSiteProfiles NAC domain profile. 10 156 IPR003441 GO:0003677|GO:0006355
Lele15g0492 282 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 209 - -
Lele15g0492 282 SUPERFAMILY NAC domain 8 156 IPR036093 GO:0003677|GO:0006355
Lele15g0492 282 Gene3D NAC domain 19 160 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0492 Lele-ChrLele15 2893235 2896322 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0492 6 157 NAC Transcription Factor Family AT1G56010 58.750 8.98e-64 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele15g0492 NAM 1.2e-37 No_clan