Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0490 ATGAACTTCATTGAAGCTAAGAGACGAGAAGGAGATCCCTCCACCACCACCACCACCTTCGATCTCCAGTCCCAAACCTTCAAGTTTCCTATGGATTCCCTCCAACAATTCATGGACCCTTCTTGTCACTCCGAAAACAAACTCCCCACCACCACCATCGCCTCCCCCACCGGCGCCGCCACCTCTTCCACCTCCACCACCACCGCCAGCAGCAGCAGCCGCTACGAGAACCAGAAGCGCCGTGACTGGAATACCTTCGGTCAGTACCTCAAGAACCACCGTCCTCCTCTCTCCCTCTCCAGATGTAGCGGGGCACACGTACTTGAATTTCTAAGGTACCTGGACCAATTTGGTAAGACCAAAGTGCACATACCGATGTGTCCATTTTATGGGCACCCGAACCCTCCGGCACCATGTCCATGCCCTCTCCGGCAAGCGTGGGGTAGTCTGGATGCGCTCATCGGCCGGCTGCGAGCGGCTTTCGAAGAGAATGGAGGGAAGCCGGAAGCTAACCCGTTCGGAGCTCGAGCTGTGAGGCTGTACCTGCGTGAGGTTCGCGATCTGCAGTCGAAAGCAAGAGGTATTAGCTATGAAAAGAAGAAGCGAAAGCGTCTTCCTCCTCCACAACAACAGCAGCAGCAACAATCGTCTATGTTTCCAACTTCAGGTGCAACTCATCATCAGTGA 687 0.5473 MNFIEAKRREGDPSTTTTTFDLQSQTFKFPMDSLQQFMDPSCHSENKLPTTTIASPTGAATSSTSTTTASSSSRYENQKRRDWNTFGQYLKNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHIPMCPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKKRKRLPPPQQQQQQQSSMFPTSGATHHQ 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0490 228 Pfam ALOG domain 65 187 IPR006936 -
Lele15g0490 228 MobiDBLite consensus disorder prediction 45 74 - -
Lele15g0490 228 MobiDBLite consensus disorder prediction 207 228 - -
Lele15g0490 228 ProSiteProfiles ALOG domain profile. 74 201 IPR006936 -
Lele15g0490 228 MobiDBLite consensus disorder prediction 45 78 - -
Lele15g0490 228 PANTHER PROTEIN G1-LIKE2 57 216 IPR040222 -
Lele15g0490 228 MobiDBLite consensus disorder prediction 192 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0490 Lele-ChrLele15 2881857 2882666 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2370 13 29378333 29380617 Lele15g0490 15 2881857 2882666 CCT
Lele14g2298 14 27711289 27713573 Lele15g0490 15 2881857 2882666 CCT
Lele15g0050 15 302939 306946 Lele15g0490 15 2881857 2882666 CCT
Lele16g0053 16 342015 345631 Lele15g0490 15 2881857 2882666 CCT
Lele13g1917 13 26836517 26837320 Lele15g0490 15 2881857 2882666 hybridization
Lele14g1852 14 25178068 25179743 Lele15g0490 15 2881857 2882666 hybridization