Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0476 ATGACTGGCTCTGGTTCTCCCTGTGGAGCTTGCAAATTCTTGAGAAGGAAATGTGTGAGAGGTTGTGTTTTTGCACCTTACTTTTGCCATGAGCAAGGAGCTACCCATTTTGCAGCCATTCATAAGGTGTTCGGTGCAAGCAACGTTTCCAAGCTCCTTGCTCACCTCCCTGTGAGTGACCGTAGTGAAGCCGCCGTCACAATCTCCTACGAAGCTCAGGCTAGGCTTCAGGATCCTATCTATGGCTGTGTTTCTCATATCTTCGCCCTCCAACAGCAGGTGGTCAATTTACAAGCACAGCTAGCTTATCTCAGGGAACAAGCAGCTCAAAGTTTTGTCAATGCCTCTGCCATTGAAAACCCAAACGAAAACCACTGTGAAAAACCTACTGCCACTTTCCCTCATGATCTTCATGGTTGGTTCCAGACCGAAAATTCCGACAGGCAGGCAGGGCCTCATCAGTTTCTTCCAAACATGTATAATGATTCCTCGACAACAATACAGCATTACGGGAGTAGCAGTAGTAGCAATCCTTTCATGAATCTAAACCCTATCGGGAATTACGAGAATTCAGGAACCCTGGATGAAAGCATCTCATTCTCAAGCTTCGATGAGACTGCTTCTAATAACTCCATGTCCTATGACGTGCCAGCAAACAGCAAGCAGTGGGGATTTCATGAAGTGGATGACCTTCAGTCAGTGGCTTTTGGTTTCAGTCGATCGGCTTCATGA 732 0.4672 MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLAHLPVSDRSEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLAYLREQAAQSFVNASAIENPNENHCEKPTATFPHDLHGWFQTENSDRQAGPHQFLPNMYNDSSTTIQHYGSSSSSNPFMNLNPIGNYENSGTLDESISFSSFDETASNNSMSYDVPANSKQWGFHEVDDLQSVAFGFSRSAS 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0476 243 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Lele15g0476 243 Coils Coil 87 107 - -
Lele15g0476 243 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Lele15g0476 243 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0476 Lele-ChrLele15 2776971 2777802 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0476 7 136 AS2 family AT3G58190 75.758 1.18e-70 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele15g0476 LOB 1.3e-36 No_clan