Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0475 ATGACTTCCGCTGCTGGCTCTGGCTCTGGTTCTCCCTGCGGGGCTTGCAAGTTCCTCCGAAGAAAGTGCGCCGCCGATTGCATATTTGCGCCCTACTTCTGCTCCGATCAAGGCCCCGCTAGATTTGCCGCCATTCATAAGGTGTTTGGGGCTAGCAATGTTTCTAAATTGCTCTTGCATATACCCGCTCGTGATCGCTGTGAGGCCGTCGTCACTATTGCTTATGAAGCCCAGGCTCGGATTAGAGACCCTGTTTATGGTTGTGTCGCTCACATTTTTTCCTTGCAACAACAGGTGGCGTTCTTGCAGGCACAGCTGATGCAAGTGAAGGCTCAGCTAGCGCAGAAGAACCTAATGGAAAGCAGGATCCTTGAAAACCAGTGGGCAGGGAATCATAATATTGTGGGTGGTCAAGCAATGAATGCATACAACATGAACCCTATATCTCCTCAGAGCTCTCTCGAGTCAATTGACCACAACATGGGTGATGGAATTAACATGCAAGATATACGAAGTAGAGAGGAATTTCCATTCCTTAAAAGAAGATCTCATAACAATGATTTGGGTGAGCTCCATCAGCTTGCGCTCAGGATGATGAGGAACTAG 606 0.4851 MTSAAGSGSGSPCGACKFLRRKCAADCIFAPYFCSDQGPARFAAIHKVFGASNVSKLLLHIPARDRCEAVVTIAYEAQARIRDPVYGCVAHIFSLQQQVAFLQAQLMQVKAQLAQKNLMESRILENQWAGNHNIVGGQAMNAYNMNPISPQSSLESIDHNMGDGINMQDIRSREEFPFLKRRSHNNDLGELHQLALRMMRN 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0475 201 ProSiteProfiles LOB domain profile. 11 113 IPR004883 -
Lele15g0475 201 Coils Coil 92 112 - -
Lele15g0475 201 Pfam Lateral organ boundaries (LOB) domain 12 110 IPR004883 -
Lele15g0475 201 PANTHER LOB DOMAIN CONTAINING PROTEIN 8 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0475 Lele-ChrLele15 2769504 2770357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0475 7 201 AS2 family AT2G42430 54.237 1.32e-75 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele15g0475 LOB 1.6e-36 No_clan