Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0474 ATGTGCTTTATCTGTCTCTTGCTTAAACCTTCTACTTCTATAATAGCCTCCGATCCTCTCTCTATTCCCACATCAAAATTCGCTCTCATGGAATTCATCAGAAACCCAGAAGAGTCCAGGAGCTCCAGCGACGAAACCGATAATACGACGGGGATTGGAAGATCCTACGAGTGTGTGTTTTGCAAGAGAGGCTTCACTACGGCACAAGCTTTAGGAGGACACATGAATATACACAGAAAGGATAGAGCCAAAACCAAGCCCAGTCTTGCTCCTTCATCTTCAAGCAAACTTGTGGATCTCGGTTTCTATTCTGCACGTCCTGGGAATTACTATTTAACACCTACTCCGGAGGTAGATAGTAATTACCCTCATCAATTTTATGATCCCAGTACAATCAGATCGTCTTCGCATGTACAGTTTGAAGATCGGGACGTGTTTGGACAAGATTGGAGGACCGGAAGCTTGAGCTTGTATACTAATCCATTCTGCGTACGCGACAAGATACAAGACAATACACCAGAGGATGGGCTGGATTTGGAGCTTCGACTGGGTTATCAACCATAG 564 0.4468 MCFICLLLKPSTSIIASDPLSIPTSKFALMEFIRNPEESRSSSDETDNTTGIGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKTKPSLAPSSSSKLVDLGFYSARPGNYYLTPTPEVDSNYPHQFYDPSTIRSSSHVQFEDRDVFGQDWRTGSLSLYTNPFCVRDKIQDNTPEDGLDLELRLGYQP 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0474 187 Gene3D Classic Zinc Finger 38 99 - -
Lele15g0474 187 Pfam C2H2-type zinc finger 56 80 - -
Lele15g0474 187 ProSiteProfiles Zinc finger C2H2 type domain profile. 56 83 IPR013087 -
Lele15g0474 187 ProSitePatterns Zinc finger C2H2 type domain signature. 58 78 IPR013087 -
Lele15g0474 187 SUPERFAMILY beta-beta-alpha zinc fingers 54 83 IPR036236 -
Lele15g0474 187 PANTHER OS07G0101800 PROTEIN 41 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0474 Lele-ChrLele15 2762358 2762921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0474 30 98 C2H2 Transcription Factor Family AT3G09290 45.455 9.03e-17 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele15g0474 zf-C2H2_6 1.6e-05 CL0361