Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele15g0473 | ATGATTTGCAGATCACATCGTCCCACTGAAATTTGGGCATTTTGTTTCACTGACATTGACGTTGATTTCTGGGAAGTAGTGAGATTCGGTGATTTCCAAAGACCGCTGGAAGATGTTCAGGGTATTTCGGAAAACATTGTTGTTGGTTCTCACATTTGGGTTGGGGATCCAGAACAAGTTTGGATTGACGGAGAAGTACTGAAAATCAATGGAGAGGAAGTTGAGGTTCAAACTAGTTCTGGAAATAAGGTTGTTGCCTGTTTGTCAAAATTATATCCCAAGGATGCAGATGCTCCTGCTGATGGAGTTGATGATATGACCAAGCTTGCTTATTTGCATGAGCCAGCAGTGCTTCATAATTTAGCAACTAGATTCAAGATGAATGAGATATATACTTACACCGGAAATATTCTTATTGCTGTCAATCCCTTTCAAAATCTTCTGCACTTGTATGACACTGATGTGATGCAACAGTACAAGGGAGCTATGCTTGGAGATTTAAGCCCTCACGTATTTGCCATTGCTGAAGCTGCATACCGGGCAATGGTCAATGAGGAGAAAAGCAATGCTATTCTTGTTAGTGGTGAGAGTGGAGCTGGTAAGACAGAAACCACCAAAATGCTCATGCGTTATCTGGCATATTTGGGTGGCAATGCTGCAGCTGAAGGAGGTAGTGTTGAGCAACAAGTTTTAGAATCAAACCCAGTTCTTGAAGCATTTGGCAATGCAAAAACTGTCAGGAATAACAATTCCAGTCGTTTTGGAAAATTTGTTGAGATTCAATTCAATAAGCGTGGAAAAATATCCGGCACGGCTATTAGAACGTATCTCCTAGAGAAATCTCGTGTTTGCCAAATCTCTGATCCAGAGCGTAACTATCACTGTTTTTACCTTCTCTGTGCAGCTCCGCCTGAGGAAAAGGAGAGATATAAGTTGGGAGATCCTAAATCATTTCACTACCTTAATCAATCCAGTTGCTATGAATTAGATGGTGTTAATGCTGCCCAGGAGTACTTGAGCACGAAGAGAGCCATGGATGTAGATGCAATTTTCAGAGTTGTGGCTGCTATTCTTCATCTTGGAAACATTAAGTTTGAAAAATCAGAAGAAGACTCGTCAGTTTTAGCAGATGAAGAATCAAAGTCTCATCTCGAAATGACAGCAGAACTTCTCAAGTGTGTTCCAAGTGCTTTGGAAGATGCACTTTGTAAGCGTATGATGATTACCCCAGAGGAAGTCATTAAGAGAAGTCTTGATCCTCTTGCTGCGACAGTTAGCAGGGATGGTTTAGCCAAGACATTATATTCTCGGTTATTTGACTGGTTAGTCAAAAAAATTAATGTCTCCATTGGGCAGGACCCCAGCTCAAAATGTATCATTGGAGTTCTTGACATATATGGCTTTGAAAGCTTTAAAACTAATAGTTTTGAGCAGTTTTGTATTAATTACACAAATGAAGAGCTTCAGCAACACTTCAACCAGATGGAGCAAGAGGAATATACAAGGGAAGGGATTGATTGGAGCTACTTAGAATTCATAGATAATCAAGATGCATTGGATCTTATTGAAAAGAAACCAGGTGGAATCATTTCTTTGCTTGATGAGGCATGTATGTTTCCAAAGTCAACTCATGAAACATTTTCGCAAAAGCTTTATCAGACTTTCAAAAATAACAAGCGCTTCATCAAGCCAAAATTATCTCAATCAGATTTTACCATTGTTCATTATGCAGGGGAGGTTCAGTATCAGTCTGAACAGTTTTTAGACAAAAACAAAGACTATGTTGTTCCTGAGCATCAAGACATGCTGAGTTCTTCCAAATGTTTTTTTGTAGCAGGCCTTTTCCCCCCACTTTCTGAGGAGACGGCCAAATCTTCTAAATTTGCTTCTATCGGTGCTCGCTTTAAGTTACAATTACAACAACTGATGGATACCCTAAAATCCACAGATCCCCACTATATTAGATGTGTGAAGCCAAATAATGAATTAAAATCTGCTGTGTTTGATAATACGAATGTCATCCAACAACTTCGATCTGGTGGTGTTCTTGAAGCAGTAAGAATTAAATGTGCTGGATTTCCAACACACAGGACCTTTCGTGATTTTTTGACTCGAGTGGCTCTTCTTGCTCCAGAGATTGTCAAAGAAAAGTATGTGTACCTTAACTCAGGTTTTGTTTATATGAACTTTTTACCAAGCAGTCTTAATGTGATGCCAGATTCTGACATTTACTTGGTTTCTGGACTTGAAAACAATCCTCATATAAGCAGCTGTGATGAGAAAGATTCATGTATAAAAATTTTGCAGAAGATTGGCCTTACAGGTTATCAGATAGGGGAATCAAAGATATTCTTGAGAGCTGGTCAGATGGCTGAGTTAGATGCTCGAAGGGCTCTCCTACTTAACAACTCCGCTGTTGTTATCCAGAAACGGATCAAAACTCATCTAAATCAGAAAAGATATGTTACATTGCAAAAGTCTTCTGTCTATGTGCAATCTTTTTGTAGAGGAGAAATGGCTCGGAGATCATATTATCACATGAAGAGAAATGCAGCTGCTGTCAGAATTCAAAAGAATATTCGTGGAAAACTAGCCAGGAAAAAGTACAACCAAGTATATACTTCTGCCATTGTGTTGCAGACAGGCTTTCGGGCAATGGCAGCTCATGATGAATTGAGATATAGACTGGAAACTAGTGCATCAATTAAACTTCAGTTAGTAGAGAAAGCAATGGAAATGGAAAGCCAGGCTGTGAAGAAAGCAGTGGAAAATGAAAGCCCTTGTGTGAAAGATTCCATAAATCATTGTATAGATACTGAAAGCATTCATGCTATCAAAGAATCCTCAAGTTCTTTCCAAGACTCTGAAAAGATTGAGGCTCTTACTTCAGAATTCATAAATTTAAAGGTTATGTTGCATGAAGAAAAACAAAGAGCTGATGATTGTGAAAGGAAATATGTGGAAGCCGAAGAATCTAGAGAGGAGTTACGCAAAAAGCTAGCAGAAACAGAAAAAAGAGTATATCAGCTTCAAGACTCATTGAACAGGATGATATCTTCCATGTCAAGCCAAGTTGCGGAACTGAAATTTATATTAAGTACTTCATCAAGATTAAGTTCAACTTTTCGGCCTATTGCTAGAGTTGATGTTGCTTCCAGCAACTCTGATACTTCATCCACAGATTCTGATTTCACAGCTTCAGCTCCTGCTTCAAATACAACCAACCAGTCTAACTCCCAGCCTAGTTCTATTCAGCTAGTTGTTCAGGGTGTCACTGTAGCGGATGGTTCAGATACGCAGTTGTTTGAGGATCCTGTAGATCGGTCAGGTAAAGCTAGTAAGAGACAGTCTAGAATAGAGTGGAAATATGGTATATCCCTGCTGAGTTCCCCTGTTTTCTTGTCTTTTTTGGGGTCGTCATTGTTACTAAGGATCGGGCAGAAAGGAAATCCACTATTACTCAGTAAAAAGGTTAAAGCCTTGATGGAAGGAAACTATGTGAGAAGAGATCAGAAGCATCATGGAGAGGAAAACCTGAGCTTCGAGGAGCATTCATGGGCAAGTTCATGGCCGGCAAGAAACTACGCGTGTAGCTTCTGCAAGAGAGAATTCAGGTCAGCTCAAGCTTTGGGTGGCCATATGAACGTGCACAGGAGAGATAGGGCAAGATTGAGATCAGGCATAATACCACCCTTGTGGCTTAATTCTGAATCTCTTAAAACTAACCCTATAACAACCTCTAAGCCACCTTCTAACCCAACTTCCTTGTCTGCTCGTGAGCTTTTCGATAACGATTACTCACATCGCTCTGCAGTACTCCACCGTGCCCCTTCTCTCACTTTGTCTTCTTCCTCGACCTCCTTTGCTTCTGCGAGTCATAAGAAACCACCAATGCTCGTCACTTCTTCTTCCAAGCTCCCTCTTCTGGGCCCTCAAAGCAGGGAAATGATCATGAATGGTGACAACACGAGGAGTGGATTTAGATCAGTTAACGAGGAATTGAAGGGGTGTGCAAAGGAGAAAGGCCTTAAGGGTTTCGAGAACATTAAGGAGGATAACAGTAATAGTATCACGTTGGAGCTGGGTTTAGGGTTGCTTCAGAACCCAAAGGAGCAATTAGACTTGGAGCTTCGTCTCGGCCATTTCTAG | 4149 | 0.4049 | MICRSHRPTEIWAFCFTDIDVDFWEVVRFGDFQRPLEDVQGISENIVVGSHIWVGDPEQVWIDGEVLKINGEEVEVQTSSGNKVVACLSKLYPKDADAPADGVDDMTKLAYLHEPAVLHNLATRFKMNEIYTYTGNILIAVNPFQNLLHLYDTDVMQQYKGAMLGDLSPHVFAIAEAAYRAMVNEEKSNAILVSGESGAGKTETTKMLMRYLAYLGGNAAAEGGSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFNKRGKISGTAIRTYLLEKSRVCQISDPERNYHCFYLLCAAPPEEKERYKLGDPKSFHYLNQSSCYELDGVNAAQEYLSTKRAMDVDAIFRVVAAILHLGNIKFEKSEEDSSVLADEESKSHLEMTAELLKCVPSALEDALCKRMMITPEEVIKRSLDPLAATVSRDGLAKTLYSRLFDWLVKKINVSIGQDPSSKCIIGVLDIYGFESFKTNSFEQFCINYTNEELQQHFNQMEQEEYTREGIDWSYLEFIDNQDALDLIEKKPGGIISLLDEACMFPKSTHETFSQKLYQTFKNNKRFIKPKLSQSDFTIVHYAGEVQYQSEQFLDKNKDYVVPEHQDMLSSSKCFFVAGLFPPLSEETAKSSKFASIGARFKLQLQQLMDTLKSTDPHYIRCVKPNNELKSAVFDNTNVIQQLRSGGVLEAVRIKCAGFPTHRTFRDFLTRVALLAPEIVKEKYVYLNSGFVYMNFLPSSLNVMPDSDIYLVSGLENNPHISSCDEKDSCIKILQKIGLTGYQIGESKIFLRAGQMAELDARRALLLNNSAVVIQKRIKTHLNQKRYVTLQKSSVYVQSFCRGEMARRSYYHMKRNAAAVRIQKNIRGKLARKKYNQVYTSAIVLQTGFRAMAAHDELRYRLETSASIKLQLVEKAMEMESQAVKKAVENESPCVKDSINHCIDTESIHAIKESSSSFQDSEKIEALTSEFINLKVMLHEEKQRADDCERKYVEAEESREELRKKLAETEKRVYQLQDSLNRMISSMSSQVAELKFILSTSSRLSSTFRPIARVDVASSNSDTSSTDSDFTASAPASNTTNQSNSQPSSIQLVVQGVTVADGSDTQLFEDPVDRSGKASKRQSRIEWKYGISLLSSPVFLSFLGSSLLLRIGQKGNPLLLSKKVKALMEGNYVRRDQKHHGEENLSFEEHSWASSWPARNYACSFCKREFRSAQALGGHMNVHRRDRARLRSGIIPPLWLNSESLKTNPITTSKPPSNPTSLSARELFDNDYSHRSAVLHRAPSLTLSSSSTSFASASHKKPPMLVTSSSKLPLLGPQSREMIMNGDNTRSGFRSVNEELKGCAKEKGLKGFENIKEDNSNSITLELGLGLLQNPKEQLDLELRLGHF | 1382 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele15g0473 | 1382 | MobiDBLite | consensus disorder prediction | 1051 | 1083 | - | - | |
| Lele15g0473 | 1382 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 47 | 96 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Lele15g0473 | 1382 | ProSiteProfiles | Myosin motor domain profile. | 101 | 798 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Lele15g0473 | 1382 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 76 | 850 | IPR027417 | - | |
| Lele15g0473 | 1382 | CDD | MYSc_Myo11 | 115 | 786 | IPR036018 | - | |
| Lele15g0473 | 1382 | PRINTS | Myosin heavy chain signature | 235 | 262 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Lele15g0473 | 1382 | PRINTS | Myosin heavy chain signature | 188 | 213 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Lele15g0473 | 1382 | PRINTS | Myosin heavy chain signature | 131 | 150 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Lele15g0473 | 1382 | PRINTS | Myosin heavy chain signature | 459 | 487 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Lele15g0473 | 1382 | PRINTS | Myosin heavy chain signature | 508 | 536 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Lele15g0473 | 1382 | SUPERFAMILY | beta-beta-alpha zinc fingers | 1192 | 1221 | IPR036236 | - | |
| Lele15g0473 | 1382 | FunFam | unconventional myosin-Va | 851 | 899 | - | - | |
| Lele15g0473 | 1382 | Pfam | Myosin N-terminal SH3-like domain | 49 | 85 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Lele15g0473 | 1382 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 1197 | 1217 | IPR013087 | - | |
| Lele15g0473 | 1382 | ProSiteProfiles | IQ motif profile. | 824 | 853 | IPR000048 | GO:0005515 | |
| Lele15g0473 | 1382 | PANTHER | MYOSIN | 93 | 1099 | - | - | |
| Lele15g0473 | 1382 | Pfam | IQ calmodulin-binding motif | 826 | 844 | IPR000048 | GO:0005515 | |
| Lele15g0473 | 1382 | Pfam | IQ calmodulin-binding motif | 851 | 869 | IPR000048 | GO:0005515 | |
| Lele15g0473 | 1382 | Pfam | Myosin head (motor domain) | 103 | 717 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Lele15g0473 | 1382 | Gene3D | - | 692 | 799 | - | - | |
| Lele15g0473 | 1382 | Gene3D | - | 469 | 649 | - | - | |
| Lele15g0473 | 1382 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 348 | 627 | - | - | |
| Lele15g0473 | 1382 | FunFam | Myosin heavy chain | 291 | 346 | - | - | |
| Lele15g0473 | 1382 | SMART | iq_5 | 800 | 822 | IPR000048 | GO:0005515 | |
| Lele15g0473 | 1382 | SMART | iq_5 | 848 | 870 | IPR000048 | GO:0005515 | |
| Lele15g0473 | 1382 | SMART | iq_5 | 823 | 845 | IPR000048 | GO:0005515 | |
| Lele15g0473 | 1382 | ProSiteProfiles | IQ motif profile. | 849 | 875 | IPR000048 | GO:0005515 | |
| Lele15g0473 | 1382 | SMART | MYSc_2a | 95 | 799 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Lele15g0473 | 1382 | Coils | Coil | 972 | 1013 | - | - | |
| Lele15g0473 | 1382 | Gene3D | - | 801 | 850 | - | - | |
| Lele15g0473 | 1382 | Gene3D | - | 851 | 902 | - | - | |
| Lele15g0473 | 1382 | Gene3D | - | 291 | 347 | - | - | |
| Lele15g0473 | 1382 | Pfam | C2H2-type zinc finger | 1195 | 1219 | - | - | |
| Lele15g0473 | 1382 | Gene3D | Kinesin motor domain | 104 | 688 | IPR036961 | - | |
| Lele15g0473 | 1382 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 1195 | 1222 | IPR013087 | - | |
| Lele15g0473 | 1382 | SMART | c2h2final6 | 1195 | 1217 | IPR013087 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele15g0473 | Lele-ChrLele15 | 2741618 | 2757499 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele15g0473 | 41 | 1003 | Myosins gene family | AT1G08730 | 62.513 | 0.0 | 1249 |