Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0471 ATGGCTGATAAATTATGCCCGAACGAAGAAGAGAAGGCGATGTTTGAATCTGTGCTAGGTGTGGCAGCCACTGCGTTCTTTGTTTCGGCCATTTCCAATAATGTTTTCTCCGACATAATTGTTCCATCTGGAGGTGACTTGGGTCTCCTTTCCAGGTTGTCCCAGGTTGTTGAAGTGTCCAAATGCACCTATGCCATCTTTTGGCAGGTGGTGGGCTTGAAATCTGGCGGCTCTGCGTTGGTTTGGGGTGATGGATTTTGCCGTGATCCCAAAGGGGGTGATCAGAATGGAGCTGGCCAAGAGAAGGAGGAGGCAAAAGGCCGAGTGTTGCAGAAGCTTCGTACCTGCTTTGGTGGGCCGAAAGAGTCTGATTCTGCAAAATTGGGGAGGGTCTCAGATATGGATATGTTTTACTCAACTTCAATGTATTATATATTTGGTTTTGATTCCCGGTATGGCCCTGGAAGTTCATTCAAGTCTGGTAAATCAGTTTGGGCTCGGGACTTTTCTCATTGTCTGAACCAGTATGAATCGAGATCGTTTCTAGCAAATTTGGCTGGTTTTCAAACGGTTGCTTTTATACCTCTCAAGTCTGGGGTTATTGAGCTTGGTTCAAAAGAAGTGATGCCTGAAGATTTTAATATTTTGGAGATGGTTAGAACAACCTTTGGAGAACCTAATTCTGGACAGGCAAAGGTGTATCCCAAGATTTTTGGGCGTGAGCTAAGCCTTGGGGATGCAAAATCTCATTCCATAACTATCAGTTTCTCCCCCAAGGTGGAAGATGATTCTGGTTTCACTTCAGACTCTTGTGAGGTACAAGCATTGGGGACTAACCATGTTTTTGGGAATTCTTCCAATGGGAGCATAGCCGATAGTACCGAAGCAAAATTGTTCCCACAACTGAATCAAACGATTGGTGGGAATTTCAATGCTCAAGCGAGGGTTTCTTGTTTGGAGCTCGGTAATGATGACTTGACACATCATCCAGATGAACGGAAGCCGAGGAAAAGAGGGAGGAAACCTGCCAATGGTAGAGAGGAACCCCTAAATCACGTTGAAGCAGAGAGACAGAGACGGGAGAAACTTAACCAGAGGTTTTATGCCTTAAGATCCGTTGTTCCTAACATATCAAAAATGGACAAGGCATCTCTACTCGGTGATGCCATTACCTATATCACTGATCTGCAGATGAAGATCAAGGTGCTGGAAGCTGAGAAGGGTTTGATGAACAACAAGGACAAGCAGTTGCCATTGCCAGATATTGATTTTCAGGCCAGACAGGATGACACGGTTTTGAGCGTGAGCTGTCCATTGGATACCCATCCTGTTTCCGGGATTGTGAAGACTTTAAGAGAGCATCAAATTATACCTCAAGATTCCATTGTTTCAACTGCTGATGATAAGGTCATCCACACATTCTCCATAAAAACTCATGGTGGGGAGAATGCTGCTGTACAGTTGAAGGAGAAGCTCGAAGCCTCCCTATCCAAAGACTGA 1500 0.45 MADKLCPNEEEKAMFESVLGVAATAFFVSAISNNVFSDIIVPSGGDLGLLSRLSQVVEVSKCTYAIFWQVVGLKSGGSALVWGDGFCRDPKGGDQNGAGQEKEEAKGRVLQKLRTCFGGPKESDSAKLGRVSDMDMFYSTSMYYIFGFDSRYGPGSSFKSGKSVWARDFSHCLNQYESRSFLANLAGFQTVAFIPLKSGVIELGSKEVMPEDFNILEMVRTTFGEPNSGQAKVYPKIFGRELSLGDAKSHSITISFSPKVEDDSGFTSDSCEVQALGTNHVFGNSSNGSIADSTEAKLFPQLNQTIGGNFNAQARVSCLELGNDDLTHHPDERKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAITYITDLQMKIKVLEAEKGLMNNKDKQLPLPDIDFQARQDDTVLSVSCPLDTHPVSGIVKTLREHQIIPQDSIVSTADDKVIHTFSIKTHGGENAAVQLKEKLEASLSKD 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0471 499 Pfam Helix-loop-helix DNA-binding domain 351 397 IPR011598 GO:0046983
Lele15g0471 499 SMART finulus 353 402 IPR011598 GO:0046983
Lele15g0471 499 FunFam Transcription factor bHLH13 340 414 - -
Lele15g0471 499 MobiDBLite consensus disorder prediction 323 358 - -
Lele15g0471 499 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 350 414 IPR036638 GO:0046983
Lele15g0471 499 CDD bHLH_AtAIB_like 344 413 - -
Lele15g0471 499 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 51 223 IPR025610 -
Lele15g0471 499 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 347 396 IPR011598 GO:0046983
Lele15g0471 499 PANTHER MYC 45 495 IPR045084 GO:0003700|GO:0006355
Lele15g0471 499 Coils Coil 393 413 - -
Lele15g0471 499 Gene3D - 340 413 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0471 Lele-ChrLele15 2724153 2725652 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0471 1 498 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G16430 48.911 2.33e-158 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele15g0471 bHLH-MYC_N 1.8e-36 CL0161