Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0466 ATGCCGCTCAATCCACCAGCCCTCAAATCCTCCATTGCCTACCATGCACCTTCCTTACCCCCCTCATGTCGTCGAAACCCTTCTCTAATTTTCCCTTGCTCTCGCCCTCGCTCCGTTTTCGCCCGCAACGGCGTCCAAATCTCGTTGCCCAAACTCTTCACTGCCTCAATCGCCTCTGTTCCCTGCACTGCCGAAAACGACTGGAAGTTGAGGAGCTCTGGAATCAAGGATAACGATGTTGCTACACTGGGGAACCTCTGTGTCGACATTGTGCTCAAGGTCCCTCAGTTGCCGCCTCCCTCAGTCGAGGAACGCAAGGAATTAATGAAACAGTTATCGGCCTCTCCACCTGACAAGAAATACTGGGAAGCTGGCGGGAACTGCAATATGGCTATAGCAGCATCAAGAATGGGACTTGACTGCATTGCAATTGGTCAAGTGGGTAATGAGATATATGGGAAGTTTTTGCGTGACGTGCTTAATGATGAGGGCATTAGGATGGTGCAAATGAGTGATAATGCTGATGTTGCCAACAACTCTAGTGCCTCATACGAAACACTTCTGTGCTGGGTTCTTGTCGATCCTTTACAGAGACATGGTTTTTGTAGCAAGGAGCCTTTATTTCACTCGATGAAGCAATTGTCCACAGAAGTAAAGGTGGCTATTAAAAAGTCAAAGGTCTTATTTTGTAATGGATATGGCTTCGATGAGCTCTCTCCTGATTTAATACTCTCGGCAGTGGAATATGCTGTTGAAGCCGGCACAGCAGTTTTCTTTGATCCTGGGCCACGTGGAAGGAGTCTTTCAACCGGGACAGCAGAAGAACAAAGAGCCCTTTACGAGTTTCTGAGGATGAGTGATGTTCTTCTCCTAACTTCTGATGAGGCTGAGTCATTAACTGGCATAGGAAATCCAATATTAGCAGGGCAAGAGTTGCTTAAAAGAGGGATCCGCACAAAATGGGTGATTGTGAAAATAGGTTCCCGAGGTTCAATCCTCATATCTAAGTCGAGTGTAGCTTGTGCACCTGCATTCAAGGCCAATGTTATTGACACCGTTGGATGTGGGGACAGTTTTGTGGCTCCCATTGCCTACGGTTTTATAAATAAGATGCCAATGGCTAATACGTTAGCAATAGCAAACGCAGTTGGCGCTGCCACTGCCATGGGTTGCGGTGCTGGTAGGAACGTAGCTACACTGGATAAAGTCACAGATATATTGCGATCATCAAACCTTAACGTAGATGACGAATTTTGGACTGATCTACTTGAAAAGAACGTGGGTGCTCAGGAAATAGTATTTCTGTCAAACGACGTGGTCATCGGAAAAAGAAATAAGCTCAAACATGTCTCCTTCAATAAGGTTGCCTCTGAATTGTTGCACAGGTTCAAATTTCCCCAGCTAGAGGAGAAAGTGCTTTCTTGA 1425 0.4632 MPLNPPALKSSIAYHAPSLPPSCRRNPSLIFPCSRPRSVFARNGVQISLPKLFTASIASVPCTAENDWKLRSSGIKDNDVATLGNLCVDIVLKVPQLPPPSVEERKELMKQLSASPPDKKYWEAGGNCNMAIAASRMGLDCIAIGQVGNEIYGKFLRDVLNDEGIRMVQMSDNADVANNSSASYETLLCWVLVDPLQRHGFCSKEPLFHSMKQLSTEVKVAIKKSKVLFCNGYGFDELSPDLILSAVEYAVEAGTAVFFDPGPRGRSLSTGTAEEQRALYEFLRMSDVLLLTSDEAESLTGIGNPILAGQELLKRGIRTKWVIVKIGSRGSILISKSSVACAPAFKANVIDTVGCGDSFVAPIAYGFINKMPMANTLAIANAVGAATAMGCGAGRNVATLDKVTDILRSSNLNVDDEFWTDLLEKNVGAQEIVFLSNDVVIGKRNKLKHVSFNKVASELLHRFKFPQLEEKVLS 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0466 474 PANTHER OS03G0164700 PROTEIN 9 472 - -
Lele15g0466 474 Gene3D - 77 409 IPR029056 -
Lele15g0466 474 Pfam pfkB family carbohydrate kinase 83 393 IPR011611 -
Lele15g0466 474 SUPERFAMILY Ribokinase-like 79 412 IPR029056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0466 Lele-ChrLele15 2698206 2702092 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele15g0466 15 2698206 2702092 Lele13g2267 13 28790602 28795113 CCT
Lele15g0466 15 2698206 2702092 Lele14g2203 14 27134674 27137374 CCT
Lele15g0466 15 2698206 2702092 Lele15g0145 15 870825 875340 CCT
Lele13g1945 13 27016869 27020791 Lele15g0466 15 2698206 2702092 hybridization
Lele14g1873 14 25330446 25334095 Lele15g0466 15 2698206 2702092 hybridization