Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0462 ATGGCGGATGTTGAAGCAGCAGATGTCGCACCCGGACAGCCGAAGAAGAGGACATTCAAGAAGTTCAGTTTCAGAGGAGTCGATTTGGATGCGCTCCTGGACATGTCTACTGATGAGCTTGTCAAACTCTTCCCTGCTCGGGCCCGCAGAAGAGTCCAACGCGGTCTGAAGCGAAAGCCCATGGCACTGATCAAGAAACTGCGTAAAACGGTAAGATGTTTTGCTGACTCTGCCCCAAAAAAACAAGATGTCAGTATTAACTTGGTAGACCGTAGAATCTTACTAGAACCGTGGCATCACGTGGCTGGCGATCGGATCGAGTGA 324 0.5031 MADVEAADVAPGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFPARARRRVQRGLKRKPMALIKKLRKTVRCFADSAPKKQDVSINLVDRRILLEPWHHVAGDRIE 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0462 107 Gene3D 30s Ribosomal Protein S19; Chain A 9 100 IPR023575 GO:0003735|GO:0005840|GO:0006412
Lele15g0462 107 PANTHER RIBOSOMAL PROTEIN S19P FAMILY MEMBER 12 75 IPR002222 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0462 Lele-ChrLele15 2681078 2681971 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0462 1 103 Cytoplasmic Ribosomal Protein Gene Family AT5G09500 62.136 2.67e-30 103
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele15g0462 15 2681078 2681971 Lele15g0462 15 2681078 2681971 ECH
Lele13g1948 13 27038269 27040173 Lele15g0462 15 2681078 2681971 hybridization
Lele14g1877 14 25355973 25358026 Lele15g0462 15 2681078 2681971 hybridization