Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0458 ATGCAATTTCCATCTACATCTTGGCCATTGGAGAATAGATCTCCAGTTTGCAGGAAATGCATCTATGATAAACTTACAGATGAGGAATTAGAACATTGTCCAATCTGTAATATTGATCTGGGCTGTGTTCCGCTTGAGAAATTGAGGCCAGACCCCAATATACAAGATGTAAGAGCTAAAATTTTCCCTTTGAAGAGAAGAAAGGCAAGAACACCTGAGGCTGTTCTGTCTATAACAATACCTGCTAGAAGAAAGGAGAGATCACTTTCATCTTTGGTTGTCAGCACTCCCAGAGTATCAACACAGGTAACCATGACTGGGAGAAGAACAAAACCTACTAGAAAGGCCACCGGTCTGCGAGCCCCTAGTTTTTCCATCGAAAAGCCTGTTAAAAAAGAGGAATCAGTAGAAGATCATAAAGAGAGTTCGAGCTCACCAGACACTTTGAACAAGTTTACTCAGAATATCAGACAGAGTTTGTCCCCTCTTGAGTCTAAACGATCCTTACACGCCAAAGAGGTAGACAATGAAGTGGAACCACGGGAAGCAAAATTGGATCTTTGGAAACCTTTGAATTGTTTGGTAGAAGTGGCAAGTAGGAGTAAATCTTTCAAGTCTAGTGTGCAAGGGTCTGATGCTAAACTAGAACCCGTGCAAATAAATGAGAATGACTCTCAAGTGCAAACACCCAAAAATAAAGAGAATAAGCGCAAAGCGAAAGTTGAGAATGAAAAAGCAGACCCTGATCCAATCTCTTCAAATACAGCAAAGCCTAATAAATCTCGTAAAGTTCGTAGTAAAAGGGAGCCTCTTTTTAAAGAACCAGGCATATCACCTCAAGCTGTTCTGGATGCAAACAGTGCTACATTCAAAAGGAGAACTGGTCCACTTTGGTTCGCCTTAGTAGCTGCTGAAGATCAGTGA 924 0.4123 MQFPSTSWPLENRSPVCRKCIYDKLTDEELEHCPICNIDLGCVPLEKLRPDPNIQDVRAKIFPLKRRKARTPEAVLSITIPARRKERSLSSLVVSTPRVSTQVTMTGRRTKPTRKATGLRAPSFSIEKPVKKEESVEDHKESSSSPDTLNKFTQNIRQSLSPLESKRSLHAKEVDNEVEPREAKLDLWKPLNCLVEVASRSKSFKSSVQGSDAKLEPVQINENDSQVQTPKNKENKRKAKVENEKADPDPISSNTAKPNKSRKVRSKREPLFKEPGISPQAVLDANSATFKRRTGPLWFALVAAEDQ 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0458 307 MobiDBLite consensus disorder prediction 100 181 - -
Lele15g0458 307 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 16 307 IPR044807 GO:0004842
Lele15g0458 307 MobiDBLite consensus disorder prediction 229 247 - -
Lele15g0458 307 MobiDBLite consensus disorder prediction 126 145 - -
Lele15g0458 307 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 13 87 IPR013083 -
Lele15g0458 307 MobiDBLite consensus disorder prediction 202 228 - -
Lele15g0458 307 MobiDBLite consensus disorder prediction 146 165 - -
Lele15g0458 307 MobiDBLite consensus disorder prediction 202 280 - -
Lele15g0458 307 MobiDBLite consensus disorder prediction 166 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0458 Lele-ChrLele15 2657326 2659534 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0458 16 307 C3H Transcription Factor Family AT2G30580 48.822 1.74e-75 233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1280 06 8155041 8165261 Lele15g0458 15 2657326 2659534 CCT
Lele07g1482 07 9040489 9043865 Lele15g0458 15 2657326 2659534 CCT
Lele08g1274 08 8106148 8117740 Lele15g0458 15 2657326 2659534 CCT
Lele13g1952 13 27056538 27058744 Lele15g0458 15 2657326 2659534 hybridization
Lele14g1881 14 25382179 25386665 Lele15g0458 15 2657326 2659534 hybridization