Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0453 ATGGAAGTTATTGGGCTGAAGAAGCAGGAGAAGATGGGATTTGAGGAGACGGAGCTGAGGCTTGGACTGCCTGGAAATGGAGGCTCTGCTGCTGCTGAAGGAGGAGGAGGAGAAGCTGCGAGGAAGAGAGGATTCTCTGAGACTGAGAATAATGGCACCGTGGATTTGATGCTGAATCTCTCTTCTTCCAAAGAAGCTGATCCTTCCTCTGACCAAGCCAACCAGAAGACCCTTCTTCCCGCCGATCCCGCCAAGCCTCCTGCCAAGGCTCAAGTGGTGGGATGGCCACCGGTGAGATCGTTCCGTAAGAACATGTTAGCCCAGAAGAAGAACGGAGAAGAGAGTGATCAGAAAAGCAGCCCTAACAATGGAAGCTTCGTGAAAGTGAGCATGGACGGAGCTCCATATCTTCGCAAAGTGGACCTCAAGATGTACAAGAGTTATCAAGACCTCTCTGATGCCTTAGGCAACATGTTCAGTTCCTTCACCATTGGGAATTGTGGATCCCAAGGACTGAAGGATTTCATGAATGAGAGTAAGCTGATGGATCTGTTGAACAGCTCCGACTATGTCCCGACCTATGAGGACAAGGATGGCGACTGGATGCTTGTCGGTGATGTTCCATGGGAGATGTTCGTTGAATCCTGCAAGCGCTTGCGTATTATGAAAGGAAAGGAGGCTATTGGGCTCGCACCGAGGGCCATGGAGAAATGCAAGAACCGAAGCTAG 729 0.5062 MEVIGLKKQEKMGFEETELRLGLPGNGGSAAAEGGGGEAARKRGFSETENNGTVDLMLNLSSSKEADPSSDQANQKTLLPADPAKPPAKAQVVGWPPVRSFRKNMLAQKKNGEESDQKSSPNNGSFVKVSMDGAPYLRKVDLKMYKSYQDLSDALGNMFSSFTIGNCGSQGLKDFMNESKLMDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLAPRAMEKCKNRS 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0453 242 ProSiteProfiles PB1 domain profile. 124 224 IPR000270 GO:0005515
Lele15g0453 242 MobiDBLite consensus disorder prediction 46 77 - -
Lele15g0453 242 MobiDBLite consensus disorder prediction 15 95 - -
Lele15g0453 242 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 12 229 IPR003311 GO:0005634|GO:0006355
Lele15g0453 242 Pfam AUX/IAA family 16 233 IPR033389 -
Lele15g0453 242 MobiDBLite consensus disorder prediction 108 127 - -
Lele15g0453 242 SUPERFAMILY CAD & PB1 domains 116 223 - -
Lele15g0453 242 Gene3D - 118 236 - -
Lele15g0453 242 FunFam Auxin-responsive protein 119 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0453 Lele-ChrLele15 2633812 2635596 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0453 115 227 B3 DNA Binding Superfamily AT3G61830 32.743 6.43e-09 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lele15g0453 AUX_IAA 1.2e-84 CL0072