Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0452 ATGGAGAGTTCATCAGTATCAATGGGTGAGCTGAACCTGAAGGACACAGAGCTAAGGTTGGGATTGCCAGGCAGCGACGAGCCAGAGAAACGTTGCATTGTTGGAAGCAAAAGGAAATATTCAGCCGAGGAAACAAGTCGTGAGGAGAAATCAACAGGCAAGAGTAGTGATGCCAAAAGTGATCACGACCAGTCAGACAACTGCCCACCAGCAAAGGCACAAGTAGTGGGATGGCCTCCAGTGAGAAGTTTCAGGAGGAATGTGCAACAAAAGAAGGAAGAAGAGGGTGGAAGGTACGTGAAAGTGAGCATGGCTGGGGCTCCATACTTGAGGAAGACAGATGTGAAGGTTTATAAGAGCTACCCAGAAGTGCTCAAGGCGTTGGAAAATATGTTCAAGTGCACTTTCGGTGAATATTCAGAAAGGGAGGGATACAATGGATCTGAATATGTTCCAACGTATGAAGACAAAGACGGTGACTGGATGCTTGTTGGAGATGTTCCATGGGAGATGTTCATATGCTCATGCAAGAGGCTCAAAATCATGAAAGCATCTGAAGCTAAGGGTTTGGGTTCTCTATGA 582 0.4639 MESSSVSMGELNLKDTELRLGLPGSDEPEKRCIVGSKRKYSAEETSREEKSTGKSSDAKSDHDQSDNCPPAKAQVVGWPPVRSFRRNVQQKKEEEGGRYVKVSMAGAPYLRKTDVKVYKSYPEVLKALENMFKCTFGEYSEREGYNGSEYVPTYEDKDGDWMLVGDVPWEMFICSCKRLKIMKASEAKGLGSL 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0452 193 Gene3D - 91 192 - -
Lele15g0452 193 MobiDBLite consensus disorder prediction 20 66 - -
Lele15g0452 193 ProSiteProfiles PB1 domain profile. 97 189 IPR000270 GO:0005515
Lele15g0452 193 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 10 188 IPR003311 GO:0005634|GO:0006355
Lele15g0452 193 SUPERFAMILY CAD & PB1 domains 94 183 - -
Lele15g0452 193 Pfam AUX/IAA family 36 191 IPR033389 -
Lele15g0452 193 FunFam Auxin-responsive protein 92 193 - -
Lele15g0452 193 MobiDBLite consensus disorder prediction 1 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0452 Lele-ChrLele15 2626892 2627591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0452 89 192 B3 DNA Binding Superfamily AT2G46530 34.615 2.46e-11 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lele15g0452 AUX_IAA 5.5e-54 CL0072