Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0447 ATGGACAACCACTCGTCTCACGCGGCCGGAACCATCCGCTCCCGTATCTCCCAATCCCCTTCTCCCTCTCACTCTGCTTCTGCCTCTGCTACCTCCACCATCCACAAGCGCAAGATGGCGTCTGACGATCACGCCCCTCCCTTTCCCCCCTCTTCATTCTCCGCCGACACCCGCGACGGCGCTCTAACCTCCAATGATGACCTCGAGAGCATTTCTGCTCGCGGCGCCGATTCCGACTCCGACGATGAATCCGAGGATGCCGTTGTTGACGAGGAGGAGGAGGATTACGACAATGACTCCTCCATGCGCACCTTCACTGCCGTTAGGCTTGAAAACCCCCCTTCAGCTCCGCGGAATACCAAGCTCCAAAAGGATAATACGACGGTCAAGATAGAGAATACGGATGGTGCCAAAGACGGTGCCACCGCCGGGACTACTATCGTGGGAACCATTCCCACCTCGACCTCAGTTCCAGGCATTATGGTTAAGGAGGACGCAACAAAGATTTTTACTGATAATCTGCAGACTAGTGGGGCATACTGTGCGAGGGAAGAGAGTCTCAAGAGAGAGGAAGAAGCAGGGAAGCTGAAATTCGTATGCCTTGCAAATGATGGTGTTGATGAGCACATGGTTTGGTTGATAGGGTTGAAGAATATTTTTGCTAGACAACTTCCCAATATGCCCAAGGAATACATTGTCCGACTTGTTATGGATAGGAGCCACAAGTCTGTGATGCTTATAAGACGTAATCAAGTTGTTGGAGGAATCACATATCGCCCGTATGTAAGCCAAAAGTTCGGTGAGATAGCCTTTTGTGCGATAACAGCTGATGAGCAAGTAAAAGGTTACGGCACCAGACTGATGAATCACTTGAAACAGTTTGCTCGTGATGAGGATGGATTGACACACTTTCTAACATATGCTGATAATAATGCTGTTGGCTATTTTATCAAGCAGGGCTTCACAAAAGAGATTCACTTGGAGAAAGATCGATGGCAAGGGTATATAAAGGATTATGATGGAGGAATTCTCATGGAATGCAAGATTGATCCAAAGCTCCCACACACTGATTTATCAACTATGATTCGTCGTCAGAGGCAGGCTATTGATGAAAAGATAAGAGAGCTGTCAAACTGTCACATAGTTTATCCTGGATATGATTTTCAGAAGAAAGAAGCCGGTATTCCTAAAAAATTGATCAAAGTTGAGGACATCCCTGGTCTGAGAGAGGCTGGATGGACTCCTGATCAGTGGGGTCATTCTCGATTTAGAAGTTTAAGTGTTTCTACAGACAGCTCTACAAATCAAAAACATTTGACTGCATTTATGCGATCACTTCTAAAGTCAATGCACGATCATGCTGATGCCTGGCCATTCAGGGAACCAGTTGATGCCCGGGATGTTCCTGATTATTATGACATCATCAAAGATCCAATGGATCTGAAGACAATGTCGAAGAGGGTGGAGTCTGAGCAATATTATGTTACATTTGAGATGTTCGTTGCGGATGTCAGAAGAATGTTCGCCAACGCACGGACCTATAACTCTCCAGACACGATTTATTACAAATGCGCGACCAGGCTGGAATCCCATTTTCAAAGCAAGGTTCAATCAGGTCTACAGTCTGGCACCAAAATTCAGTAG 1644 0.4665 MDNHSSHAAGTIRSRISQSPSPSHSASASATSTIHKRKMASDDHAPPFPPSSFSADTRDGALTSNDDLESISARGADSDSDDESEDAVVDEEEEDYDNDSSMRTFTAVRLENPPSAPRNTKLQKDNTTVKIENTDGAKDGATAGTTIVGTIPTSTSVPGIMVKEDATKIFTDNLQTSGAYCAREESLKREEEAGKLKFVCLANDGVDEHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMLIRRNQVVGGITYRPYVSQKFGEIAFCAITADEQVKGYGTRLMNHLKQFARDEDGLTHFLTYADNNAVGYFIKQGFTKEIHLEKDRWQGYIKDYDGGILMECKIDPKLPHTDLSTMIRRQRQAIDEKIRELSNCHIVYPGYDFQKKEAGIPKKLIKVEDIPGLREAGWTPDQWGHSRFRSLSVSTDSSTNQKHLTAFMRSLLKSMHDHADAWPFREPVDARDVPDYYDIIKDPMDLKTMSKRVESEQYYVTFEMFVADVRRMFANARTYNSPDTIYYKCATRLESHFQSKVQSGLQSGTKIQ 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0447 547 Gene3D - 424 544 IPR036427 GO:0005515
Lele15g0447 547 MobiDBLite consensus disorder prediction 1 35 - -
Lele15g0447 547 Gene3D - 192 356 - -
Lele15g0447 547 Pfam Acetyltransferase (GNAT) family 244 321 IPR000182 GO:0016747
Lele15g0447 547 ProSiteProfiles Bromodomain profile. 451 522 IPR001487 GO:0005515
Lele15g0447 547 FunFam Histone acetyltransferase KAT2A 193 357 - -
Lele15g0447 547 Pfam Bromodomain 444 526 IPR001487 GO:0005515
Lele15g0447 547 PANTHER GH11602P 46 543 IPR037800 GO:0004402
Lele15g0447 547 ProSitePatterns Bromodomain signature. 456 514 IPR018359 -
Lele15g0447 547 SMART bromo_6 432 541 IPR001487 GO:0005515
Lele15g0447 547 MobiDBLite consensus disorder prediction 56 71 - -
Lele15g0447 547 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 203 350 IPR000182 GO:0016747
Lele15g0447 547 PRINTS Bromodomain signature 454 467 IPR001487 GO:0005515
Lele15g0447 547 PRINTS Bromodomain signature 503 522 IPR001487 GO:0005515
Lele15g0447 547 PRINTS Bromodomain signature 468 484 IPR001487 GO:0005515
Lele15g0447 547 SUPERFAMILY Bromodomain 421 537 IPR036427 GO:0005515
Lele15g0447 547 CDD Bromo_gcn5_like 439 537 - -
Lele15g0447 547 CDD NAT_SF 250 297 - -
Lele15g0447 547 MobiDBLite consensus disorder prediction 1 102 - -
Lele15g0447 547 MobiDBLite consensus disorder prediction 79 98 - -
Lele15g0447 547 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 217 351 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0447 Lele-ChrLele15 2595079 2600796 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lele15g0447 Bromodomain 2.1e-22 No_clan