Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0433 ATGGATTACCCGTATCTAGTGAAAGAAGAGTACTTGGAAGCGACTTCATCTCGTTCGGGAGGTGAAGCATCGACAATTCCCCCTCCGCTGCCAATGGAGGGTCTTCACGAGCTGGGACCCCCACCATTTCTGACCAAGACATTCGACGTGGTGGACGACCCAGCTACCAATCATATGGTTTCTTGGAGCAGAGGGGGCGCTAGTTTTGTGGTTTGGGATCCACATGCCTTCTCTACGAGTCTCCTTCCCAGATACTTTAAGCACAACAATTTCTCAAGCTTTGTCAGGCAATTGAACACTTATGGATTTAGGAAAATTGATCCAGACAGATGGGAGTTTGCAAATGAAGGATTTCTGAGAGGCAACAGGCATCTCCTGAGGAACATTAGGAGAAGGAAGGCACCTGCTAATTTGAGTCTTTCCCAACAAGTACAACAGCAAGGTCATTGTGTTGAAGTAGGAAGGTTTGGACTAGACGAGGATATTGACCGTTTGAGGCGAGACAAGCAAGTGTTAATGATGGAGCTGGTGAGACTTAGGCAGCAGCAACTGAACACTAGATCATACCTTCAGGCCATGGAACAAAGGTTACAAGGCACAGAAAAAAAGCAGCAACAGATGATGGCTTTCTTAGCCAGAGCTATGAAAAATCCAGCCTTTCTCCAGCAGCCACTCCAACAGAAGGACAAGAGAAAGGAGCTTGAAGAAGCTATAACTAAGAAGAGAAGGAGGCCAATTGAGCAAGGACCAAGTTGTGTTCGGGAGTCAAGCAGTGGAAGGGAAGCAATGAACCCTATAAAAGCTGAGCCTTTACAATTTAGTCACTGTGTGTTTGAAGTGTCAGAGCTAGAAGGGTTAGCTATGGAAATGCAGGGTTATGGTATGGGGAAAAGAGAACAGGAGGCGTCAGAAGAACCACAGGAGAGGCTGGGAAAAGAACTGGATGAGGGTTTCTGGGAAGAACTGTTCAGTGAAAATTTTGAGGGTGAAATAGACATTCCAAGCACTGACGGTGAGGATGAAGATCTTAATGTCATGGCCAATCGCTTAGGCTACTTGGGTTCGAGTCCTAAGTGA 1077 0.4643 MDYPYLVKEEYLEATSSRSGGEASTIPPPLPMEGLHELGPPPFLTKTFDVVDDPATNHMVSWSRGGASFVVWDPHAFSTSLLPRYFKHNNFSSFVRQLNTYGFRKIDPDRWEFANEGFLRGNRHLLRNIRRRKAPANLSLSQQVQQQGHCVEVGRFGLDEDIDRLRRDKQVLMMELVRLRQQQLNTRSYLQAMEQRLQGTEKKQQQMMAFLARAMKNPAFLQQPLQQKDKRKELEEAITKKRRRPIEQGPSCVRESSSGREAMNPIKAEPLQFSHCVFEVSELEGLAMEMQGYGMGKREQEASEEPQERLGKELDEGFWEELFSENFEGEIDIPSTDGEDEDLNVMANRLGYLGSSPK 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0433 358 ProSitePatterns HSF-type DNA-binding domain signature. 82 106 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele15g0433 358 Pfam HSF-type DNA-binding 43 132 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele15g0433 358 SMART hsfneu3 39 132 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele15g0433 358 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 29 269 IPR027725 -
Lele15g0433 358 Coils Coil 162 182 - -
Lele15g0433 358 SUPERFAMILY "Winged helix" DNA-binding domain 39 132 IPR036390 -
Lele15g0433 358 FunFam Heat shock transcription factor 1 36 133 - -
Lele15g0433 358 PRINTS Heat shock factor (HSF) domain signature 81 93 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele15g0433 358 PRINTS Heat shock factor (HSF) domain signature 43 66 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele15g0433 358 PRINTS Heat shock factor (HSF) domain signature 94 106 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele15g0433 358 Gene3D - 36 133 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0433 Lele-ChrLele15 2492969 2494886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0433 24 356 HSF AT3G22830 53.951 2.08e-127 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lele15g0433 HSF_DNA-bind 5.3e-32 CL0123