Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0407 ATGCAATCACTTAATCATGCAATCAAGCATCATTTGTCTTCGTACAGGAGTGGGCAGGGAAATCTATGGCTGAATTTACCATATACTCCTTTTATTGTAAGCTCCGAGCCCTACTGTATTACCCGAGCCTCAACTATAAATTCAGACCTCTGCTTCCTTCTCTTTCCATGCCGTGCTTATATTTCTCTTCTCTTTACTATTGGTTATTTCTCTGCTTTCCTAGCTTTCCCATATTTGTTCTCTCGAGTCATCATCCCAAAAGTTTGTCCCGAGTCCTGCTTCTTTCCTCTGTTTTGCTCTGAGATAGCTAAAATGTCTTCCTCAAGTGTGTACCAAGGGTTCCAATCATGTCTTACGGAACCTCGTTTTCTGTTGATGAAATTGGCTCCACCCTTGGAATTGCCTTCCCTTTCACAGTTTGAGACACACCCACTTACCCCGCCCACCACCACCTGTGAAAAAGACTTGAAACAGGACAAAACCCCAAATGCTGACATGGGTGGCTGGGCTTTTCTTCAGTCTCTTTGCAATAAAACTGACAAGTCTGAAACCGAAAAAATCTATGTCCACCCTCTGGTAAAGAGTTCCTCTTCCTCCCTGAGTGCCAAGAGCTTGGAGATGTGCACGGAGAGCTTGGGATGCGAGACGGGCAGTGATGGAAGTGAAACCAGTGATGGAATTGCTCTGTTTTCATTAGAAGGAAACACGCCCTCTTTGGCTACTCCAGAGAGTGACAGAATCTGTGTGTCAAAAAGATCGAATCGCAGTGTTTCTAACTTTCCTCCTCCGCTGTCTTCAATGAGTAACAATGGTGGGGTTCAAGTTAGGCCTCGTCGTGAAGATGGTCGTCTCATCTTGGAAGCAGTGCCTACCCCTTCCCAATCTTCTTGTTTCAAAGCAGAGCGTAGCAATGGCAGGCTTATGCTTCAACTCTTGCCCACCTTCAACCATTCTCTCTGTGATGACTGCGAATCAGTTGAAGCAGAAGAAGAGGAAAAAGAAGAAGGGACTGAAAAAGAAGAAGAAGATGCTGATGAGGTGGAAGAGTACTGGGATGAGAATCATGAGAATGAGGAAGGTGGAACGGGAATGAGAAAGATTCCAAGGCCAAGTAGGTGCAGTGAAAATGGGAACATGAGCAACCAAATGCTTGATTGGGAGCCACTCTGGGTGACTACTTGA 1182 0.4543 MQSLNHAIKHHLSSYRSGQGNLWLNLPYTPFIVSSEPYCITRASTINSDLCFLLFPCRAYISLLFTIGYFSAFLAFPYLFSRVIIPKVCPESCFFPLFCSEIAKMSSSSVYQGFQSCLTEPRFLLMKLAPPLELPSLSQFETHPLTPPTTTCEKDLKQDKTPNADMGGWAFLQSLCNKTDKSETEKIYVHPLVKSSSSSLSAKSLEMCTESLGCETGSDGSETSDGIALFSLEGNTPSLATPESDRICVSKRSNRSVSNFPPPLSSMSNNGGVQVRPRREDGRLILEAVPTPSQSSCFKAERSNGRLMLQLLPTFNHSLCDDCESVEAEEEEKEEGTEKEEEDADEVEEYWDENHENEEGGTGMRKIPRPSRCSENGNMSNQMLDWEPLWVTT 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0407 393 PANTHER FANTASTIC FOUR-LIKE PROTEIN (DUF3049) 110 378 IPR021410 -
Lele15g0407 393 MobiDBLite consensus disorder prediction 252 275 - -
Lele15g0407 393 MobiDBLite consensus disorder prediction 324 393 - -
Lele15g0407 393 MobiDBLite consensus disorder prediction 324 355 - -
Lele15g0407 393 MobiDBLite consensus disorder prediction 252 273 - -
Lele15g0407 393 MobiDBLite consensus disorder prediction 373 393 - -
Lele15g0407 393 Pfam Fantastic Four meristem regulator 259 311 IPR046431 -
Lele15g0407 393 Coils Coil 323 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0407 Lele-ChrLele15 2337441 2338622 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g1551 07 9559298 9566589 Lele15g0407 15 2337441 2338622 CCT
Lele05g1490 05 9540334 9540921 Lele15g0407 15 2337441 2338622 CCT
Lele15g0407 15 2337441 2338622 Lele05g1473 05 9435277 9444263 CCT
Lele15g0407 15 2337441 2338622 Lele06g1329 06 8503420 8514239 CCT
Lele15g0407 15 2337441 2338622 Lele07g1533 07 9428130 9436394 CCT
Lele15g0407 15 2337441 2338622 Lele08g1324 08 8438538 8448607 CCT
Lele15g0407 15 2337441 2338622 Lele15g0407 15 2337441 2338622 ECH
Lele13g1999 13 27345881 27347497 Lele15g0407 15 2337441 2338622 hybridization
Lele14g1931 14 25672658 25673497 Lele15g0407 15 2337441 2338622 hybridization