Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0401 ATGGCCGGTCTCGGTAGAACCAAAATCACTTTTCCTTCTCAATTCGCTTCGGCTTTTAGCTTCTGCGGGAAACTCGCCATATGCCTCGCGTCCAGCTCAAGAGGTGTTGTTTTCTTTGGGGACGGCCCTTACGTTTTTCTTCCGAACGTCGACGCCGCTCAATCGCTCACCTACACGCCACTCATTGTCAACCCAGTGAGCATGGCTTCCGCTTTCACACAAGGACAGCCTTCGTCTGAGTATTTCATCGGAGTCAAATCCATCAAAATCGACAAAAAAGTCGTGCCCAAAATGAACACCACTTTGCTGTCCCTAGACGAAGAAGGCGTTGGTGGGACTAAGATAAGTACGGTGATCCCATGCACAGTTTTGGAGGCGACGATCTTCAAGGCGGTGACGGAGGCATTCATCAGTGCTTTGGCTGCTACGAACATCACCAGGGTGGGTGGAGTTGCTCCCTTCGAAGTGTGTTTCAGTACGAAGAACGTGGGGAGCACGCGGTTGGGTGCAGCGGTGCCGACCATGGAGCTTGTGCTTCAGAACAATGCGAGTTGGTTCATTTTTGGAGCGAACTCGATGGTGCGGGTGAAGGACGATGTGCTGTGTCTTGGGGTAGTGAATGGAGGCGACAACCCGAGGACTTCAATTGTGATAGGAGGGGATCAGTTGGAGAACAATCTTTTGCAGGTTGATTTGGCTTCTTCCAGACTAGGATCCAGCTCTTTGCTCTTTGGAAGGATGACTACGTGTGCAAATTTCAACTTCACCTCCGCCCCATGA 780 0.5128 MAGLGRTKITFPSQFASAFSFCGKLAICLASSSRGVVFFGDGPYVFLPNVDAAQSLTYTPLIVNPVSMASAFTQGQPSSEYFIGVKSIKIDKKVVPKMNTTLLSLDEEGVGGTKISTVIPCTVLEATIFKAVTEAFISALAATNITRVGGVAPFEVCFSTKNVGSTRLGAAVPTMELVLQNNASWFIFGANSMVRVKDDVLCLGVVNGGDNPRTSIVIGGDQLENNLLQVDLASSRLGSSSLLFGRMTTCANFNFTSAP 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0401 259 Gene3D Acid Proteases 1 41 IPR021109 -
Lele15g0401 259 SUPERFAMILY Acid proteases 2 248 IPR021109 -
Lele15g0401 259 Pfam Xylanase inhibitor C-terminal 80 238 IPR032799 -
Lele15g0401 259 Pfam Xylanase inhibitor N-terminal 1 41 IPR032861 -
Lele15g0401 259 Gene3D Acid Proteases 42 257 IPR021109 -
Lele15g0401 259 FunFam Basic 7S globulin 42 257 - -
Lele15g0401 259 PANTHER ASPARTYL PROTEASE-RELATED 1 257 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0401 Lele-ChrLele15 2301949 2302728 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1357 06 8706542 8707600 Lele15g0401 15 2301949 2302728 CCT
Lele07g1564 07 9637722 9638726 Lele15g0401 15 2301949 2302728 CCT
Lele08g1354 08 8650102 8653633 Lele15g0401 15 2301949 2302728 CCT
Lele15g0401 15 2301949 2302728 Lele05g1490 05 9540334 9540921 CCT
Lele15g0401 15 2301949 2302728 Lele07g1550 07 9551029 9551916 CCT
Lele15g0401 15 2301949 2302728 Lele15g0401 15 2301949 2302728 ECH
Lele13g2004 13 27377195 27380781 Lele15g0401 15 2301949 2302728 hybridization
Lele14g1939 14 25713330 25714109 Lele15g0401 15 2301949 2302728 hybridization