Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0391 ATGATTCCCTGGGGCGGAGTCGGTTGCTGTTTGAGTGCGGCTGCTCTTTACCTTCTCGGGAGAAGTAGTGGCAGAGATGCCGAAATTCTTAAATCCGTTACCCGTGCCAATCAGTTTAAAGAATTAGCGCAACTGTTTGATGCTGAAATATTACCTTTGGTTGTTGCAATTTCCGGAAGAGTTGGCTCTGAAACCCCAGTTAACTGTGAATTCAGTGGTTTAAGGGGTGTAATAGTTGAAGAAACGGCAGAGCAACATTTTCTTAAACACAACGATGCTGGTTCGTGGATACAAGATTCTGCTTTAATGCTATCCATGAGCAAAGAAGTTCCTTGGATGATGGAACTAGTCGTGTTCACGTGGTTGGAGCTCGGGGCTTCTAAGGATGACATTGGAACCATCCGAATTCAACGACCCCACAAAGGGCCATTTTATGTCTCTCCGAAAACAATTGATCAGCTCATTGCGAATCTCGGGAAATGGGCAAGGTGGTATAAGTATGCATCTGTGGGCTTGACCCTTTTTGGTGCTTATTTAATAGCCAAGCATGCTATTCAGTACATCTTGGAAAGACGACGCGGTTGTGAACTTCAAAAGAGGGTTCTTGCTGCAGCTGCTAAGGGGTCAGGACAAGATAATGAAGGTGTAAAGGCTGCCAGTTCACCAGATGGTGCAAAAAGAGATCTCATAATGCCAGATTTATGTGTAATATGCCTTGAGCATGAGTATAATGCTGTTTTTGTTCCTCCATTTATAATTTCAGGTGTGGGCATATGTGCTGCTGTACAACTTGGTCTTTCATCATTTACTGTAGGATTGGAACTTGAGTTGATTCAAAGAAAACAAGGGGGGGGAAACAAAGCCCATGATCTTCTCCTTCTTGCCTTAAGCCTTCAAGTCTACATGGAGAGAAACAACCACCCAAACCATTCCTCAACCACGTGCGCGAAGATCCGCGAAGCACTGGCGAACAGTTCCGCCGTGCGAGCTATTCATCGCATCTCACACTATCATCACCAAGAACCTTCTGGTTCTCCGTTGCCCCCACCTCGACATATCAGGGGAAATTATAATGGCGAAGGAAGCGGAGCAATTCCCATCGAGTTCATCGATCACCCGAACCCGACTTTCATCGGGCAGGCCCAAGTCGGCAAAGTTGCTACCAGGATCGAACCCGAACCACATTATGCTTCTGTGAGAGGTGGAGAGAAAGGCAGGTCTACGGCAGGGGAATTTGAGCATCAACATGAGAAGAAGGATATGAATTATGTTTTCGGTGAGTTCATTCAAAGGGCTAGAGAGAAGTTAAGAACTGTGTCCAACATTGGGAAGGCGCATCAGAGCAAGCCTACACAGGACGAGGCTAATATGAATGTCGCCAGGAAAAAGGATACCCAAAAAGATCAAATTTCTGAGTTCATTAGCCGTACTAAGAAGAAGATCAGAACTACTTCAAGTATTCGATTTGGAAAGAATGAGTCCTTGAGAAGGGGGTAA 1497 0.4542 MIPWGGVGCCLSAAALYLLGRSSGRDAEILKSVTRANQFKELAQLFDAEILPLVVAISGRVGSETPVNCEFSGLRGVIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWMMELVVFTWLELGASKDDIGTIRIQRPHKGPFYVSPKTIDQLIANLGKWARWYKYASVGLTLFGAYLIAKHAIQYILERRRGCELQKRVLAAAAKGSGQDNEGVKAASSPDGAKRDLIMPDLCVICLEHEYNAVFVPPFIISGVGICAAVQLGLSSFTVGLELELIQRKQGGGNKAHDLLLLALSLQVYMERNNHPNHSSTTCAKIREALANSSAVRAIHRISHYHHQEPSGSPLPPPRHIRGNYNGEGSGAIPIEFIDHPNPTFIGQAQVGKVATRIEPEPHYASVRGGEKGRSTAGEFEHQHEKKDMNYVFGEFIQRAREKLRTVSNIGKAHQSKPTQDEANMNVARKKDTQKDQISEFISRTKKKIRTTSSIRFGKNESLRRG 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0391 498 PANTHER - 1 115 IPR044231 GO:0004842|GO:0016567
Lele15g0391 498 Pfam E3 Ubiquitin ligase 125 176 IPR022170 GO:0004842|GO:0006996|GO:0016567
Lele15g0391 498 MobiDBLite consensus disorder prediction 441 498 - -
Lele15g0391 498 MobiDBLite consensus disorder prediction 456 479 - -
Lele15g0391 498 MobiDBLite consensus disorder prediction 441 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0391 Lele-ChrLele15 2257638 2263011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0391 126 216 C3H Transcription Factor Family AT1G63900 62.637 1.85e-30 118
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g1946 14 25763484 25766811 Lele15g0391 15 2257638 2263011 hybridization