Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0371 ATGATGATTAAAATGTACATTTTGTTTTCTGTTTATGTAGAAATTCATTTACCTGTACTGGTGCAGGGGGTTGTTGGGCTTGTTTTTGGCAAAAATGAGAATTCTTCTTCAAACGAAAATAGCAATGGTAAACTGGCAGAAGATAGGAGAAATGCTATTACCGAGCTCCAGCTTGTTGTATCAGAAAGTAATTCTGCACAGCTAGCATTTGGAGCAACGGGTACATCTCATCTCTTAAGCACATCATCTGGGTTTTTATCCTGTCTTGAGTTACATGTTTTATGCATCTTTGCAGATGGGAATGCCTCTATATGCCTTTTACGATGCTTCTGCGGTCTTGCTTTTGTTAATAACGAAGAAGCGGCATCAATCTCTTGGTCGGTGCACTTGATTTCGACCCTTCATGGAAATACGATAAATTTGAAGATGGCACAAATGAGGATGAATCAACCCTCCCACTGGTGGTGGCTTGACGATCACAGCATCTCTAAAAGGTCCCCATGGCTCCAATCCACTCTCTCTGAGCTAAATGGGAAGACAAAGGCGATGTTAAAATTGATCGAACAAGATGCGGATTCCTTTGCCCAACGTGCAGAGATGTATTACAAAAAGCGACCAGAGCTTATTGGCATGGTTGAAGATTTCTATCGGACTCACCGCTCTCTGGCAGAGCGCTATGATCAAGTCAAGCCCGAATCTGGACTTCGCCTCGTGATTTCAGGGGGATCTCCTTTTGCCTCGGTCAAGTACCAATCAGAGAAATTCATGGCTTTCACCGATCGCAGTTACGATAGCTTCTCTGAGAACTGCGATGGGGAGGAGTCTGCGGAGTCTGAAGTTGACGATCCTGAGCAAGAAGAGGAAGCTGAATTAGACAACTGCACAAAAGGGGAAGTTCCTTTTGTGGGCGTGAGTGATAAAGTCAAGAGGTTAGGTGAAGAAATCAAGAGACTTGGAGAAGAGAACAGGGTTTATAAGGATCAAGTGAAGCAGAAAGATGCCATGAGTAATGAAGTAATGATTTTGAGGGAAGAGATAGAAAGGCTCAGAGAAGAGAACAGGGAACAGAAAGATGAACTGAAAGATGCCACGAGCGATGAAGCAGCGATGTTGAGGGAAGAAATAGGAAGACTGAGAGAAGAGAACAGGGCACAGAAGGAAGAACTGAGGCAGAAGGATGAGGAGAAGATAGAGGTGATAAAACAGCTGAGTTTGGCAATAGATGTGATAAAGCAGGAGAATTCAAAGATGAGGAACTTCATTGCTAAGGACAGCAACAAGAAATGGAAGCATCCCTTTGAGTTAGACAAACTGATGGGAGCATTGTCGGGGAAGCTGTTCAATGGATATCCATGGAATCAGCCCAGTGTGGTAGCTCTCTAG 1383 0.4382 MMIKMYILFSVYVEIHLPVLVQGVVGLVFGKNENSSSNENSNGKLAEDRRNAITELQLVVSESNSAQLAFGATGTSHLLSTSSGFLSCLELHVLCIFADGNASICLLRCFCGLAFVNNEEAASISWSVHLISTLHGNTINLKMAQMRMNQPSHWWWLDDHSISKRSPWLQSTLSELNGKTKAMLKLIEQDADSFAQRAEMYYKKRPELIGMVEDFYRTHRSLAERYDQVKPESGLRLVISGGSPFASVKYQSEKFMAFTDRSYDSFSENCDGEESAESEVDDPEQEEEAELDNCTKGEVPFVGVSDKVKRLGEEIKRLGEENRVYKDQVKQKDAMSNEVMILREEIERLREENREQKDELKDATSDEAAMLREEIGRLREENRAQKEELRQKDEEKIEVIKQLSLAIDVIKQENSKMRNFIAKDSNKKWKHPFELDKLMGALSGKLFNGYPWNQPSVVAL 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0371 460 MobiDBLite consensus disorder prediction 270 291 - -
Lele15g0371 460 Pfam KIP1-like protein 154 227 IPR011684 GO:0003779
Lele15g0371 460 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 152 233 IPR011684 GO:0003779
Lele15g0371 460 MobiDBLite consensus disorder prediction 266 291 - -
Lele15g0371 460 PANTHER PROTEIN NETWORKED 4A 148 278 - -
Lele15g0371 460 Coils Coil 308 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0371 Lele-ChrLele15 2123968 2130377 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1551 05 9943537 9944980 Lele15g0371 15 2123968 2130377 CCT
Lele13g2034 13 27544148 27546293 Lele15g0371 15 2123968 2130377 hybridization
Lele14g1967 14 25887534 25889247 Lele15g0371 15 2123968 2130377 hybridization