LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele15g0357	ATGATGGAGGTTTTGAAAGACGAGTTTTCAGATCTGGAGATTGGGAATTCAGTGGAGTCGTTCCAGAAATTTCTGGTTTCACAAAGGGAGCTCTTTCATAGCCAGATCGATCAGCTTCAGAAAATCGTCGTTACGCAATGCAAACTCACTGGTGTCAATCCTCTCTCTCAAGAAATGGCAGCTGGCGCTCTGTCAATAAAAATTGGGAAAAGACCCAGGGATTTGTTAAATCCAAAAGCTGTAAATTACATGCAATTAGTTTTCGCCATTAAAGATGCAATCAGTAAGAAAGAATCTCGTGAGATCAGTGCTTTATTTGGTGTCACAGTGACACAGGTTCGTGAATTTTTCAATAGTCAACGTTCAAGAGTGAGAAGACAAGTTCGGTTGTCAAGTGAAAGGGTGTTAAGATCTAACTTCTGTGAAGAACCTCCTGATGGGTTCCCAATAAACTCTGATTCTATGATACCAATTAATCCAGCTCCCTTAAACTCTGCTGGTCCCATCAACGTAGATGAAGCTTCTTGTTCAATACAGGAGACTTCATTTTCTGGCCTAAATGGCTCAGAGAAACATTTTGTTGATAATATTTTTAGTTTAATGCGGAAAGAGGAAACTTTTTCGGGCCAGGTGAAATTGTTGGAGTGGATATTGAACATACAGAATGCTTCAGTATTAATTTGGTTTTTAGGCTGTGGAGGTGTGATGATTTTAGCAGCGTGGTTGAACGAAGCAGCTGTTGAAGAACAAACAAGTGTTCTTCTTCTTATTTTAAAGGTCCTTTGTCATTTGCCTCTGCATAAAGCCCTTCCTACGCATATTTCAGCTACATTGCAGTGTGTTAATAGACTTCGGTTTCACAGGACACCAGACATATCAAACAGGGCACGGGTTTTGTTATCAAAGTGGAGCAAATTATTAGCAAAGAACCAAGCAATAAAGAAAACTGCCGGTGTTAAACCTGGTAGTGAGGCTCAAAAGGAGATGGAGGACATTCTTTCCCTTTCAAATGAAGGTTCAGATGATTTCAGGAAACCAGAAGCTCCACAAACTGTGAAATTATTGACAGCTTCTTTGGATGATTCCACTAAGAAGTCTGTCCTAGGTGTATCAATGTCTCAGACTAGGGAGCGCAGAAAAGTGCAGTTAGTGGAGCAGCCAGGCCAAAAGACGGTGAGCAGAAGTCCTCAAGCTGCAAGAGTAGGGCCTGTAAGTCAAGGTCGTCCCATGTCTGCTGATGATATCCAGAAAGCAAAAATGCGTGCTTTATTTATGCAAAGCAAATATGGGAAACCTGGTTCATCTAAAGGAAATAAAGATGCAAAGACTGGTGGTCTGAATAAACCTCAGACAAATCAGGCCGGTCTTGGGGCTTCCTTATCTAAAGCTCCTGTATCAACCAAAACTGATGAAGATAGCAAACCTCTGTTTCTTCCTTCTAAAACTTCTAATATGAATGATGCTTCTGAATCATATTTGAGAATGGATTTGAAGGAACCTTTTTGGGAGAAGTGCAAGCAGGTGCAAATCCCGTGGAAGACGCCAGCAGAGGTGAAACTTGACGATACCTGGAGAGTTGGTGCAGGTGAAAACAGCAAAGAGGTTGATGTTCAGAAAAGTAGAAATCGGAGAGGGGAGGAGATAATTTATCGGACTATCCAGGAGATACCGCTTAATCCCCACGAGCCATGGGACCTCGAAATGGACTACGATGACACATTGACCCCACCAATTCCTATTGAACAGCTTCCTGATGTTGACGGTGCGGAAACACCAGCTCCCGCTAATGAAGGTCTTCAAGTGGCGACCCCTTCATCTTTCAACGATAATGCAAATGTAGCTGAGCCTGATCTGGAGCTGCTTGCTGTACTTCTTAAAAATCCCGAGTTGGTGTTTGCTTTGACTTCTGGGCAAGCTGGTAGCATACCGAGTGAGCAAACGGTAAAACTGCTTGACATGATCAAAAAAGGTAGTGTCAATTTGGCTGACGGTGGGGGCAAGGCGCGGGAGAAGGTGGAAGTTTGTCTTCCTTCTCCAACTCCTTCTAATGATCCAAGAACGAGTGGGTGGACGTCAGAAGTTGCAAAGAATCCTTTTTCGCGCCACAACTCGGTGCCTGACAGAAGTATCAGCTTTCCAGCAGCTGCAACCAATATGGTATTGCCGCAGGTTCCAGCAGCCCCTGGCATAGCAGTACGACAACATCAAACTGATTCACTGTCTCAAGCACCTAATGTTGTTTCTGCTTTTTCCTCTGTGCATCCATCTCTGCTTACCAATTCTCCGACAACACAAATTCTATCATCAAACATAGGTTTAAGTACCATGATGAACGACATAATCCTTGCGAATGCATCATCTGTTAACTTATCCGCTGCACACTCACCTTTAGCAATGCGGGTAGATAGCACCAGTATCAGTAGTAATGTAAAACCAATAGCTAATTTGAGAATACAAGAGGAATTGTCTAATTCACATCAGCAATCTTATGAGCTGCCATCACCAACGCCAACATCATCAAGTTCAGTCGCACCCCCACAAAGGCATTCCCATTTATCGCAGCAGTCCCATTTTTATGAGCCTTCCCCTCACAACTCTCTACATTCCTACCCTCGTATGGAAAAACAAGCTCATGTTCAAGAGTCTTGGAGAGTTAGGCAGGATATATCCTCCAGTTATCATTCTCAAGTAAATCAGAACACTTATAACGCATCAATTGACAGATCCAGGCGATCTGGTTCTTCTTGGGAGAGAAATGATTATGGAGGAGGAGGAGGAGAATTTGAATCATGGAGTCCAGATACTAGTCCAAGTAGAAATAATGGGTATATTAGGGGAAGGAATTTCCCTGAATCCAGAATGAACCCTGGGAGGAACTATAGGCCTGAGTGGTCAAGACAACGGGGTTCTTCTGGTTACTGGGATCCTAGTAGACAAGGAAGCAGGAAGTGGAATGATCAGAGACGATGA	2970	0.4323	MMEVLKDEFSDLEIGNSVESFQKFLVSQRELFHSQIDQLQKIVVTQCKLTGVNPLSQEMAAGALSIKIGKRPRDLLNPKAVNYMQLVFAIKDAISKKESREISALFGVTVTQVREFFNSQRSRVRRQVRLSSERVLRSNFCEEPPDGFPINSDSMIPINPAPLNSAGPINVDEASCSIQETSFSGLNGSEKHFVDNIFSLMRKEETFSGQVKLLEWILNIQNASVLIWFLGCGGVMILAAWLNEAAVEEQTSVLLLILKVLCHLPLHKALPTHISATLQCVNRLRFHRTPDISNRARVLLSKWSKLLAKNQAIKKTAGVKPGSEAQKEMEDILSLSNEGSDDFRKPEAPQTVKLLTASLDDSTKKSVLGVSMSQTRERRKVQLVEQPGQKTVSRSPQAARVGPVSQGRPMSADDIQKAKMRALFMQSKYGKPGSSKGNKDAKTGGLNKPQTNQAGLGASLSKAPVSTKTDEDSKPLFLPSKTSNMNDASESYLRMDLKEPFWEKCKQVQIPWKTPAEVKLDDTWRVGAGENSKEVDVQKSRNRRGEEIIYRTIQEIPLNPHEPWDLEMDYDDTLTPPIPIEQLPDVDGAETPAPANEGLQVATPSSFNDNANVAEPDLELLAVLLKNPELVFALTSGQAGSIPSEQTVKLLDMIKKGSVNLADGGGKAREKVEVCLPSPTPSNDPRTSGWTSEVAKNPFSRHNSVPDRSISFPAAATNMVLPQVPAAPGIAVRQHQTDSLSQAPNVVSAFSSVHPSLLTNSPTTQILSSNIGLSTMMNDIILANASSVNLSAAHSPLAMRVDSTSISSNVKPIANLRIQEELSNSHQQSYELPSPTPTSSSSVAPPQRHSHLSQQSHFYEPSPHNSLHSYPRMEKQAHVQESWRVRQDISSSYHSQVNQNTYNASIDRSRRSGSSWERNDYGGGGGEFESWSPDTSPSRNNGYIRGRNFPESRMNPGRNYRPEWSRQRGSSGYWDPSRQGSRKWNDQRR	989

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele15g0357	989	MobiDBLite	consensus disorder prediction	822	989	-	-
	Lele15g0357	989	MobiDBLite	consensus disorder prediction	964	980	-	-
	Lele15g0357	989	MobiDBLite	consensus disorder prediction	386	400	-	-
	Lele15g0357	989	MobiDBLite	consensus disorder prediction	370	411	-	-
	Lele15g0357	989	SUPERFAMILY	Homeodomain-like	70	133	IPR009057	-
	Lele15g0357	989	MobiDBLite	consensus disorder prediction	428	482	-	-
	Lele15g0357	989	PANTHER	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED	107	972	-	-
	Lele15g0357	989	ProSiteProfiles	'Homeobox' domain profile.	67	127	IPR001356	GO:0003677
	Lele15g0357	989	MobiDBLite	consensus disorder prediction	440	466	-	-
	Lele15g0357	989	MobiDBLite	consensus disorder prediction	822	863	-	-
	Lele15g0357	989	SUPERFAMILY	Conserved domain common to transcription factors TFIIS, elongin A, CRSP70	230	314	IPR035441	-
	Lele15g0357	989	MobiDBLite	consensus disorder prediction	931	945	-	-
	Lele15g0357	989	SMART	HOX_1	69	131	IPR001356	GO:0003677
	Lele15g0357	989	MobiDBLite	consensus disorder prediction	883	910	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele15g0357	Lele-ChrLele15	2037460	2045419	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele15g0357	446	705	Homeobox Transcription Factor Family	AT4G02560	45.489	2.95e-51	193