Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0333 ATGAGCCGCGGGGCAGCAACTGGAGCCAAAGGCAAGAAGAAGGGAGTCAGCTTCGTCATCGACTGTTCGAAGCCGGTCGAAGATAAGATCATGGACGTCGCCTCGCTTGAGAAGTTCCTTCAGGAGAGGATTAAGGTCGGTGGCAAGGCCGGTGCACTCGGTGACTCCGTCACTGTCACTCGTGACAAGAACAAGATTACCGTTACTTCCGACAGCAATTTCTCTAAACGGTATTTGAAATATTTGACAAAGAAGTACCTGAAGAAGCATAACGTGAGGGATTGGCTTCGTGTGATTGAATCAAACAAGGAGCGCAATGTGTACGAGTTAAGATACTTCAACATCGCCGAGAACGAGGGGGAGGAGGAAGACTAG 375 0.496 MSRGAATGAKGKKKGVSFVIDCSKPVEDKIMDVASLEKFLQERIKVGGKAGALGDSVTVTRDKNKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIESNKERNVYELRYFNIAENEGEEED 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0333 124 Gene3D - 5 124 IPR038526 -
Lele15g0333 124 FunFam 60S ribosomal protein L22-2 5 124 - -
Lele15g0333 124 Pfam Ribosomal L22e protein family 14 122 IPR002671 GO:0003735|GO:0005840|GO:0006412
Lele15g0333 124 PANTHER 60S RIBOSOMAL PROTEIN L22 2 124 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0333 Lele-ChrLele15 1891036 1892287 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0333 1 124 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 86.290 4.80e-67 196
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2074 13 27774299 27776190 Lele15g0333 15 1891036 1892287 hybridization
Lele14g2005 14 26115121 26116575 Lele15g0333 15 1891036 1892287 hybridization