Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0327 ATGGCCTTCGTGATTCTCCTCTTACTCTTACCTTCACTGGCTTTTGCAGAACCTCTCGCTCCTGCAACTCTATGCCAGCATACCCCCGAACCTTCTTACTGCATGTCCCTGCTTCCTCCCCAAAACGGCACCCTCCATGACTCTTGTCGCTTCTCTCTCCTCCACTCCTTAGTGCGGGCCCGCAAATTCTTGAACTCCGTCGACCAACTTCTCCGACGGCGCTCTTCTTTGTCCGCTGTGGCGGTTGCTGACCTTGAAGATTGCCGGATGCTCGCCGACCTGAACATAGATTTTCTCTCAAGTTCGTTGCAAATCGTGAATAAGACGGCTGGGTTTCTATCGGATATCGAAATTGACAGTGTTAAAACCATGCTCAGTGCCGTTTTAACCAACCATGAAACCTGCTTGGACGGCCTTCAAGACACTGCCGCTTCTTCTCATCCGAGATTAGTAAGAGGGCTGTCTTTCTCACTTTTTGATGACAAGAAGCTTTTTGGAGTCTCTTTGTCCCTTTTCACGAAGGGTTGGGTCCACGCGAGTAAACAAAGACCCGAATTATCGTGGCACCGACCTCCGCAAATGCAAGCTGTATTCCGAAATGGTAATTTGCTTCTCGCTATGTCGAACAGAACGCGTGCTATCTTCGAGGCTGCTAGTGGTAGAAAATTAGACCTGGCTTTTGAAGCTCCCTACGTGGCATTTGTGAAAGACATCGTGACGGTGAGTAAAGACGGAAGAGGTAACTTCACCACCATCAACAGTGCCCTTTCTGCAGCTCCCAACACAACTTCCTGTTCGAAAGGCTACTTCTTGATCTATGTGTCAGCTGGAGTTTACGAAGAATATGTCTACATCCATAAGGAGAAAGCCTACCTGATGATGATCGGAGATGGTATCAACAGGACTATCATCACGGGCAATCGCAGCCATGAAGATGTGTGCAAAACCTTCAGATCTGCAACATTCGCTGTGCACGGGAAGGGATTTATGGGAGTGAATATAACATTTCGCAACACAGCAGGGCCGGAAAAGCACCAAGCGGTGGCAGTGAGAAACTCAGCAAACTTGTCCTTGTTTTATAGCTGCAGCTTTGAGGGGTACCAAGACACTCTCTATGCGCATTCCATGAAACAGTTCTACAGAGAATGTGATATATACGGCACGCAATTCAATGCCATCACAGCACAAAGTCGAGAGAGTGAGGATCAGAATACGGGCTTCTCCATACATAACTGCACAATTCGAGCAGCCGAGGATCTGGAGGGGACAATGACGTACCTGGGAAGACCATGGAAGCCGCTGTCGCGGACGGTTTATATGGAGAGCTTCATGGATAGCATGATAGATGGGGCTGGTTGGCACGTGTGGCAAAATGACAATGAGAGTCGTCTGAACAGCTTGTATTACGCAGAATATAAGAATTCGGGCCCAGGCTCCGATGGCTCAAACCGGGTCACCTGGAAGGGTTATCATGTCATTAACTCTTCCATTGCTGCTGATTTCACTGTCTCCAACTTCTTGTATGGAGATTATTGGTTGCCCCGCACTGGTGTCCCCTACTCTAGTCACTTGATTAATTCCTCAATTCCTCCATAA 1596 0.4837 MAFVILLLLLPSLAFAEPLAPATLCQHTPEPSYCMSLLPPQNGTLHDSCRFSLLHSLVRARKFLNSVDQLLRRRSSLSAVAVADLEDCRMLADLNIDFLSSSLQIVNKTAGFLSDIEIDSVKTMLSAVLTNHETCLDGLQDTAASSHPRLVRGLSFSLFDDKKLFGVSLSLFTKGWVHASKQRPELSWHRPPQMQAVFRNGNLLLAMSNRTRAIFEAASGRKLDLAFEAPYVAFVKDIVTVSKDGRGNFTTINSALSAAPNTTSCSKGYFLIYVSAGVYEEYVYIHKEKAYLMMIGDGINRTIITGNRSHEDVCKTFRSATFAVHGKGFMGVNITFRNTAGPEKHQAVAVRNSANLSLFYSCSFEGYQDTLYAHSMKQFYRECDIYGTQFNAITAQSRESEDQNTGFSIHNCTIRAAEDLEGTMTYLGRPWKPLSRTVYMESFMDSMIDGAGWHVWQNDNESRLNSLYYAEYKNSGPGSDGSNRVTWKGYHVINSSIAADFTVSNFLYGDYWLPRTGVPYSSHLINSSIPP 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0327 531 SUPERFAMILY Pectin lyase-like 235 522 IPR011050 -
Lele15g0327 531 Pfam Pectinesterase 389 510 IPR000070 GO:0030599|GO:0042545
Lele15g0327 531 Pfam Pectinesterase 239 388 IPR000070 GO:0030599|GO:0042545
Lele15g0327 531 Gene3D Invertase/pectin methylesterase inhibitor family protein 22 174 IPR035513 -
Lele15g0327 531 PANTHER PECTINESTERASE 11 388 - -
Lele15g0327 531 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 23 174 IPR035513 -
Lele15g0327 531 SMART PMEI_2 16 171 IPR006501 GO:0004857
Lele15g0327 531 FunFam Putative pectinesterase 57 234 389 - -
Lele15g0327 531 Pfam Plant invertase/pectin methylesterase inhibitor 22 145 IPR006501 GO:0004857
Lele15g0327 531 Gene3D - 233 524 IPR012334 -
Lele15g0327 531 CDD PMEI-like_3 23 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0327 Lele-ChrLele15 1858692 1860450 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0327 3 525 Carbohydrate Esterase AT4G02330 50.704 0.0 535