Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0326 ATGAATTCTATATTAAGATATCGCCCTTTTCAATCTTCTTGCCCATCTTCACGAGAACATCCAAACTTCAAACATCCAACCGGCCTATACCTGAAAGACTCTGATGAGGTGGGCCACATTTCGTTTTCGTACCCCTTATCTGTAGCAGATAACCCTGTGGCCTCCCTCATAACCTCTCCATCAGACCCAGTTTGTGACTCCACCTTGCACCCTGCCCTTTGCAAAACTGTGATCGGTAATAAAAAAGGCAACGTCTTTGACTATGGCCGCATATTTCTTCGAAAGTCCTTATCTCAGTCTCGTAGGTTCTTGAACCAGGTGGATTCCCATCTGAAATCTCCATCCTCTCTGTCTCAGCCCACCATTCGAGCTCTCGAGGATTGTCGCTTCCTCGCTGAGATCAACTTCGACTCCTTATCCGACACCTTGAATGCTGTGAACAATCTTAATGATTTCCTGTCTTCCTCTAAAGCCGAAGACCTTGAAACCCTGTTCAGTGCCGTTCTGACCAACCAGCAAACATGTCAGGATGGCCTGGAAACCACAGCTTCGGATCGGAGAGTAAAGGACGATGTTTCTTCCTCGCTCTCTGACGACACCAATCTTCTCAGCGTGTCTCTTGCTCTGTTCAACAAAGGTTGGGTGCCCAAGAAGAAAATCATAACATCATGGCCACGCAATGGGATACATTTGGATTTCAGTAATGGTCGTTTGCCCCTGAACATGGCCCCCCGAGTAAAGGCCATTTTCGACTCCGCAAGACGCCACGGCAGAAAACTGCTCCAGTCCGGTGACCAAAGTGTGGAGGTCAACGACAACGTGGTTGTCAGTCAGGACGGAAGCGGAAACTTCACCACCATCAACGAGGCCATCAACGCTGCCCCTAACAACACAGCTAGCGGTGCCGGTTACTTCTTGATCTTCATCACCGAGGGTTTGTACCAAGAATACGTATCCATACCCAAACAGAAGAAGTACTTGATGTTAGTGGGAGATGGCATCAACCGCACCGTCATCACCGGAGACCACAACGTCGTCGACGGTTTTACAACTTTCAACTCAGCGACGTTTGCTGCAGCTTCGAAGGGTACCAAGACCCTTTACACACATTCTCTGAGGCAATTCTACAGAGAATGCGACATATACGGCACAGTGGACTTCATATTCGGAAATGCGGCCGTGGTTCTGCAAAATTGCAACCTGTATCCCCGGCTTCCGTTGAGCGGTCAGTTCAACGCGATCACGGCTCAGGGTCGAACGGACCCGAATCAGAACACAGGCACGTCAATACAGAATGCGACCATAAAAGCAGCTGCCGATTTGGCTCCGTCAGTAGGGTCGGTGAAGACGTACCTGGGAAGGCCGTGGAAGGAGTACTTGAGAACGGTGTTCATGGAGTCATGGATGGACAGTCTGATCAATCCTGCAGGTTGGCGGGAGTGGAATGGCGACTTTGCATTGAGCACGTTGTACTACGCAGAGTATAACAACACTGGGCCCGGAGTTGATGCAACCAGAAGGGTGACGTGGCCAGGTTACCACGTCATCAATGCCACGGATGCGGCTAATTTCACGGTGTCCAACTTCCTGACGGGGGATGCTTGGTTGCCTGAAACTGGAGTTCCATACTCTCCCGGACTCTGA 1644 0.5024 MNSILRYRPFQSSCPSSREHPNFKHPTGLYLKDSDEVGHISFSYPLSVADNPVASLITSPSDPVCDSTLHPALCKTVIGNKKGNVFDYGRIFLRKSLSQSRRFLNQVDSHLKSPSSLSQPTIRALEDCRFLAEINFDSLSDTLNAVNNLNDFLSSSKAEDLETLFSAVLTNQQTCQDGLETTASDRRVKDDVSSSLSDDTNLLSVSLALFNKGWVPKKKIITSWPRNGIHLDFSNGRLPLNMAPRVKAIFDSARRHGRKLLQSGDQSVEVNDNVVVSQDGSGNFTTINEAINAAPNNTASGAGYFLIFITEGLYQEYVSIPKQKKYLMLVGDGINRTVITGDHNVVDGFTTFNSATFAAASKGTKTLYTHSLRQFYRECDIYGTVDFIFGNAAVVLQNCNLYPRLPLSGQFNAITAQGRTDPNQNTGTSIQNATIKAAADLAPSVGSVKTYLGRPWKEYLRTVFMESWMDSLINPAGWREWNGDFALSTLYYAEYNNTGPGVDATRRVTWPGYHVINATDAANFTVSNFLTGDAWLPETGVPYSPGL 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0326 547 Gene3D Invertase/pectin methylesterase inhibitor family protein 62 212 IPR035513 -
Lele15g0326 547 SUPERFAMILY Pectin lyase-like 271 546 IPR011050 -
Lele15g0326 547 Pfam Plant invertase/pectin methylesterase inhibitor 64 209 IPR006501 GO:0004857
Lele15g0326 547 Pfam Pectinesterase 273 363 IPR000070 GO:0030599|GO:0042545
Lele15g0326 547 Pfam Pectinesterase 366 533 IPR000070 GO:0030599|GO:0042545
Lele15g0326 547 ProSitePatterns Pectinesterase signature 2. 381 390 IPR033131 -
Lele15g0326 547 PANTHER PECTINESTERASE 365 537 - -
Lele15g0326 547 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 64 212 IPR035513 -
Lele15g0326 547 Gene3D - 267 364 IPR012334 -
Lele15g0326 547 CDD PMEI-like_3 64 214 - -
Lele15g0326 547 Gene3D - 365 547 IPR012334 -
Lele15g0326 547 SMART PMEI_2 52 209 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0326 Lele-ChrLele15 1852406 1855974 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0326 59 547 Carbohydrate Esterase AT1G02810 54.152 0.0 565