Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0302 ATGGATGCCCTGTGTTTTAAAAGTGGTATAGCTGGGATACCTCCAACGATCTCCATTAACGGGCCCTTGGATGCGCGGACAAACCCATCTCAGGTAAGCGCGGTTGGGCGGTCGTCGACGGAGAAATCGACGCACAAATCCGTCTTTTCAAGATTCTCGTTTAAGTACCCTTTGAAATCTCTCTGGCCTGGCGGAAGTGGAAGTAGCAGGTACAATGGGTCGGCCATCGACGAGGCCGTATCGGTGGAAGGGAGGGATGAAAAAGCCGTTCAAGAAGACAAGGATAATGGAACAACGAATCCAGAGGGTCAGAATGAGAACTGGGTCTTGAAGATTTTGCATGTCAAATCTATCTGGAGGGGTGAACAGGGGAAAAGTGCTCATGGCGGTGGTGATGAAGATACGCAAATCGAAGAGAAGGAGGATGTCGCCAATGATCAAATAAACGGGTCGGAGTGTGATAATGAGGAGCCATGTGATGCTTGCAAGATTGATGATGATGACGATGATAAAGAGATTCAGTTTGATAGGAATTCATTTTCGAGGATGCTTCGGAGGGTGTCGCTAGCTGAAGCCAGATTGTACGCGCAGATGTCCTACTTGGGAAGCTTGGCATACTGTATACCCAAAATGAAGACAGAGAATCTATTGAAAAATTATGGACTGCGTTTTGTAACTTCATCACTAGACAAAAGAGGCTCCTCTACAACGGCTGAAAAAAATCAGGTGTCAACTGAAACTCAGGAAGTAGAAACTAATGTACATGACAGAGAAGAAAACAAGGAACGGAAGAACAGTAGACCCAAGATTAGTGCATTGGCTGCTTATGAGATTGCTGCCTCTGCAGCCTCTTACCTCCATGCTCAGACCAGGAGCATAATTCCATTTAGATCCTCAAAAGATGGGGTTGGTGAAGGTTCACTTGAAGGAGGCAGTGAAAGTGTTGATGGTGTCAACATGGTAAACACAGAGGTAGCTTCTTTGATCGCGACTACTGATTCAGTGACAGCAGTAGTGGCTGCAGAGGAGGACGTGAAGCAGGCTGTTGCAGATGATTTGAACTCAACAAGTTCATCACCCTGTGAATGGTACATATGTGATGATGACCAGAATGGGACTAGATTTTTCGTCATCCAGGGTTCTGAGTCCCTAGAATCCTGGCAAGCAAACCTACTTTTTGAGCCTGTTCAATTTGAGGGGCTGGATATTCTTGTCCATAGAGGTATATACGAGGCTGCTAAAGGGATCTACCAAAAGATGTTGCCAGAAGTTCATGCACACCTAAAATCTCAAGGTTCTTGTGCAGCCTTCCGTTTCACAGGGCATTCTCTCGGGGGAAGTCTGGCATTGCTCGTAAATCTCATGCTGCTGATGAGAGAAGAAGTGCCAGTCTCCTCCCTGCTTCCTGTTATAACCTTCGGTGCCCCTTCCATCATGTGTGGAGGGGACAGACTGCTGGACAAGCTAGGATTGCCCCGGAGTCATGTTCAGGCAGTTATAATGCACAGAGACATTGTACCACGAGCCTTTTCTTGCAATTATCCTAATCATGTAGCAGAGCTGCTAAAGGCTATTAATGGAAGCTTCCGTAATCATCCTTGTCTTAATAGCCAGAAGGTGTTATATACACCTATGGGTGAACTGCTAATTCTGCAGCCAGATGAGAAACTTTCCCCGGGACATGACCTCCTTCCGTCAGGTTGTGGTCTATATCTTTTGAGTGGTCCTTCGTCAGGATCCAATCAGAACTTCTACGGGCAGCTCCTAACTGCACAGCTGGTGTTCTTGAACTCACCACACCCACTTGAGATCTTAAGTGACCGATCTGCTTATGGCTCAGGTGGAACTGTACAAAGGGATCATGACATGAATTCCTACTTAAAATCTGTAAGAAGCGTGATTCGCGACGAACTTAAAAGAACCCGAAGGAGGAGGAGAGAGCACAGGCGTAAGGCGTGGTTGCCTCTGGTGGCACTGGCACCTCATGGGATTGATGCAGGCTCCGTTGTTAGGAGTTCGGCGGTATCAATGAATGTGAGTGAAGAGGGGTCAGCCTTCGCAGGAGTCATAAAAACAGGGAGAGAGTCATTGAAAAGGTTCAGTAGGCTAGTTGCATCCCAACACATGCATTTGTTTGTAGTGTTCCTGTTTCCAGCACGCTTGTTACTCCCGAGCCCCATCAATTTCCATTGA 2193 0.4697 MDALCFKSGIAGIPPTISINGPLDARTNPSQVSAVGRSSTEKSTHKSVFSRFSFKYPLKSLWPGGSGSSRYNGSAIDEAVSVEGRDEKAVQEDKDNGTTNPEGQNENWVLKILHVKSIWRGEQGKSAHGGGDEDTQIEEKEDVANDQINGSECDNEEPCDACKIDDDDDDKEIQFDRNSFSRMLRRVSLAEARLYAQMSYLGSLAYCIPKMKTENLLKNYGLRFVTSSLDKRGSSTTAEKNQVSTETQEVETNVHDREENKERKNSRPKISALAAYEIAASAASYLHAQTRSIIPFRSSKDGVGEGSLEGGSESVDGVNMVNTEVASLIATTDSVTAVVAAEEDVKQAVADDLNSTSSSPCEWYICDDDQNGTRFFVIQGSESLESWQANLLFEPVQFEGLDILVHRGIYEAAKGIYQKMLPEVHAHLKSQGSCAAFRFTGHSLGGSLALLVNLMLLMREEVPVSSLLPVITFGAPSIMCGGDRLLDKLGLPRSHVQAVIMHRDIVPRAFSCNYPNHVAELLKAINGSFRNHPCLNSQKVLYTPMGELLILQPDEKLSPGHDLLPSGCGLYLLSGPSSGSNQNFYGQLLTAQLVFLNSPHPLEILSDRSAYGSGGTVQRDHDMNSYLKSVRSVIRDELKRTRRRRREHRRKAWLPLVALAPHGIDAGSVVRSSAVSMNVSEEGSAFAGVIKTGRESLKRFSRLVASQHMHLFVVFLFPARLLLPSPINFH 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0302 730 Gene3D alpha/beta hydrolase 320 544 IPR029058 -
Lele15g0302 730 MobiDBLite consensus disorder prediction 231 267 - -
Lele15g0302 730 MobiDBLite consensus disorder prediction 250 267 - -
Lele15g0302 730 Coils Coil 631 651 - -
Lele15g0302 730 CDD Lipase_3 359 515 - -
Lele15g0302 730 Pfam Lipase (class 3) 376 513 IPR002921 GO:0006629
Lele15g0302 730 MobiDBLite consensus disorder prediction 231 249 - -
Lele15g0302 730 MobiDBLite consensus disorder prediction 21 41 - -
Lele15g0302 730 MobiDBLite consensus disorder prediction 82 105 - -
Lele15g0302 730 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 27 722 IPR043367 GO:0008970
Lele15g0302 730 SUPERFAMILY alpha/beta-Hydrolases 358 551 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0302 Lele-ChrLele15 1714652 1717844 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0302 1 728 Acyl Lipid Metabolism Gene Families AT1G02660 55.088 0.0 714
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0355 05 2040062 2042472 Lele15g0302 15 1714652 1717844 CCT
Lele13g2108 13 27946260 27949446 Lele15g0302 15 1714652 1717844 hybridization
Lele14g2034 14 26286793 26290048 Lele15g0302 15 1714652 1717844 hybridization