Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0292 ATGGCAACCATAGGTGGTCCGAGCCTTTCGAGCCCTGGTGTTTTGATTAGGACATCGGAGTCACAGAAGATCCATAGGGTCAAGTTTCCGGTGCTGCTAGGCCAAAGATTCGGATTGGGTTGCATGATGGCAGTTCGGCCTGTGCGGGCAGCACCGGATCGCATATCGGGGAAGGTGGAAGAGAGCATAAAGAAGGCAGAGGAGACGTGCTCAGACAACCCGGCGAGCGGTGAGTGCGTGGCGGCGTGGGATGAAGTGGAGGAGCTAAGCGCGGCGGCCAGCCATGCAAGGGACAGGAAGAAGGAGTCGGACCCACTGGAGAACTACTGCGAGGACAACCCAGAGACCGACGAGTGCCGCACATATGATAACTGA 375 0.576 MATIGGPSLSSPGVLIRTSESQKIHRVKFPVLLGQRFGLGCMMAVRPVRAAPDRISGKVEESIKKAEETCSDNPASGECVAAWDEVEELSAAASHARDRKKESDPLENYCEDNPETDECRTYDN 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0292 124 MobiDBLite consensus disorder prediction 92 124 - -
Lele15g0292 124 PANTHER CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC 28 124 IPR039314 -
Lele15g0292 124 Pfam CP12 domain 55 123 - -
Lele15g0292 124 SMART CP12_2 55 124 IPR003823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0292 Lele-ChrLele15 1650909 1651283 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0161 06 975025 975459 Lele15g0292 15 1650909 1651283 CCT
Lele07g0360 07 2001905 2003249 Lele15g0292 15 1650909 1651283 CCT
Lele08g0164 08 1006112 1006546 Lele15g0292 15 1650909 1651283 CCT
Lele15g0292 15 1650909 1651283 Lele05g0353 05 2026728 2029975 CCT
Lele15g0292 15 1650909 1651283 Lele06g0170 06 1039531 1041936 CCT
Lele15g0292 15 1650909 1651283 Lele07g0370 07 2093054 2095413 CCT
Lele15g0292 15 1650909 1651283 Lele08g0174 08 1085452 1087857 CCT
Lele13g2120 13 28016581 28016955 Lele15g0292 15 1650909 1651283 hybridization