Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0288 ATGGTGTCCAAAGCAGCAGACTCTGCGATCAAACTAAGAAAATCACATGGACAGCCAGCAAATGATGCTGTTGAAACCTTGCTATGCAAGATTGATCAGCTGGAAAAGCAAATCCAGGCGGAGAGATTTGTATCAATTAAAGAAAAACTATTGAGGAATGGGAAGAAGGTACAGTGTCATGTTTCCGAGGTTTTCTCAGCAATATCAAAAAGGGATTCTTTACATATACAGGAAAATAGGATTAATCAGATGCTTTCCTCAAGAATTGACCACCCTCTATTTAAGTTCAATGCTATATCTCAAGGTTCTGGTGACAAGGATCTCATTAACAGCCTAGATGTAATTTTTACAACAAGTGTCAAGATGCCTTACACCGAAAGATTACCACCATACACGTCTTGGATATTTTTGGACAGAAATCAGAGAATGGCTGAAGATCAGTCTGTAGTCGGCAGAAGGCGTATCTACTACGATCAACATGGAAGTGAAGCGTTAATATGCAGTGACAGTGAGGAAGAGCTAACCGAACCTGAGGAAGATAAACATGAATTTACTGGTGCTGAAGATCGAATTTTATGGATGGCATTTGAGGAATATGGGTTAACTGAGGAAGTATTGGATACTGTGAGCGAGTCTGTTGGAGGTACTAGACAGGAAATTCAGGATAGGTTCAAATTTCTCAAGGAAAAGAACACCGGGAGGCAGGACCAGTGGTCTGAAGGTTCTGGAGATTATGAATCTCGGATTGGCATAAGTTTGGAGGAAAGCCTGAGTACTGCTTTAGATTCTTTTGATAACCTTTTTTGTCGCCGATGCATGCAGATGTTTGATTGTCGCTTGCATGGATGTTCTCAACCCCTAATATATCCTAATGAAAAGCAGCCAGTTTGGTTTGAACATGAAGAGGACTGGAAGCCATGCAGTGATCAGTGTTACCTAAGGTTAAAGGCTGAGAAAACTTCATCAGATCCAAGGTGTCTGCAGGGAGATAAACCCACAACTACGGAGGAGGGAGTATTGACTTTGGCACCCTCTGGTGCAGCAGAGCCAGGAAATCAGAGTACTGCAACTACCTTGGTGGATGAAAGACGCAATTCTACGAACACAACACCTTCTCCAACAGAAGTTGCTGGATGTAAAGATCTCAACTTAAATGTGCCTGTTGCAGAGAGTCTGGGGAAACGGAAGACCATAAATCAGTCAGATAAAGCACTGTGTGACTTAACATTGCTTCCTGATGATTCGGAGAGTTCTTGTAAAAAGCAAAAGAAAATCACAGATAATGACGTAGTCACTGCAATTAATGATTTTAACAGAGACCTAAATGTCAGTGCATGTGATGAAAAATGTGTTATTGCTTCTGAATGTTTAAATGATTCTGTAGAGCATACTTCTAACAAATCAATACTTTCTGGGAGCACTTGTCATGGTGAACATGGAAATGTTGAGGATGGATCTAAAGATGGCATGGCTGAGGCAGAATTCAATGAGTCATCCAATTTCATGAATGAGCATGTTGAAGGGATGCAAAATCTTTCAGAATGGAAACCTCTGGAGAAAGAGTTATACTTGAAGGGAGTAGAAATGTTTGGGAGAAACAGTTGCCTCATAACAAGGAATTTACTTTCTGGCCTAAAAACCTGCATGGAAGTAGCTACTTACATGCATACTGGTGGAGCGTCAGTTCCCAACAGATCTAATGTTCCCCCAAATTCACTCAGCAATGACAACGGAAAAACTGATGCAGAATGCCCAGACCAAGAGATGCCAACAAGAGCAAGATTGCTACGGAAAAGAGGCAAAACAAGGAAATTTAAATATTCTTGGAAATCTGCTGGCCACCCATCAATATGGAAAAGAATTGCAGATGGAAAAAACCAATCTTGTAAGCAATATACACCCTGTGGATGCCAATCAATGTGTGGAAAGCAGTGTCCATGCCTTCATAATGGAACTTGCTGTGAAAAATATTGTGGGTGCTCCAAAAGCTGCAAAAATCGATTCAGAGGTTGCCACTGTGCCAAGAGTCAATGCAGAAGTCGACAATGTCCATGCTTTGCTGCTGGACGCGAATGTGACCCAGATGTTTGTCGAAACTGCTGGGTTAGTTGCGGCGACGGTTCATTAGGAGAGCCACCTAAACGTGGAGATGGTCAATGTGGAAATATGAGGCTTCTTTTAAGGCAACAACAGAGGATTCTGTTGGCAAAGTCTGATGTCGCAGGATGGGGAGCATTCTTAAAGAACCCAGTTAACAAAAATGATTACCTAGGAGAATACACTGGGGAACTCATCTCCCACCGAGAAGCAGACAAGCGTGGAAAAATATATGATCGTGCCAACTCATCATTCCTTTTCGATTTGAATGACCAGTATGTTCTGGATGCTTATCGCAAAGGAGACAAACTAAAATTTGCGAACCACTCATCAAATCCAAACTGTTATGCAAAGGTGATGCTGGTTGCTGGGGATCATCGAGTGGGAATCTTTGCAAAGGAACACATTGAAGCGAGTGAGGAGCTGTTCTACGATTATCGTTATGGTCCAGATCAAGCACCCGCCTGGGCTCGCAAACCAGAGTCTTCCAAGAGAGACGAATCGGCAGCTTCTCAAGGAAGGGCCAAGAAACACCAGTCTCATTGA 2643 0.4238 MVSKAADSAIKLRKSHGQPANDAVETLLCKIDQLEKQIQAERFVSIKEKLLRNGKKVQCHVSEVFSAISKRDSLHIQENRINQMLSSRIDHPLFKFNAISQGSGDKDLINSLDVIFTTSVKMPYTERLPPYTSWIFLDRNQRMAEDQSVVGRRRIYYDQHGSEALICSDSEEELTEPEEDKHEFTGAEDRILWMAFEEYGLTEEVLDTVSESVGGTRQEIQDRFKFLKEKNTGRQDQWSEGSGDYESRIGISLEESLSTALDSFDNLFCRRCMQMFDCRLHGCSQPLIYPNEKQPVWFEHEEDWKPCSDQCYLRLKAEKTSSDPRCLQGDKPTTTEEGVLTLAPSGAAEPGNQSTATTLVDERRNSTNTTPSPTEVAGCKDLNLNVPVAESLGKRKTINQSDKALCDLTLLPDDSESSCKKQKKITDNDVVTAINDFNRDLNVSACDEKCVIASECLNDSVEHTSNKSILSGSTCHGEHGNVEDGSKDGMAEAEFNESSNFMNEHVEGMQNLSEWKPLEKELYLKGVEMFGRNSCLITRNLLSGLKTCMEVATYMHTGGASVPNRSNVPPNSLSNDNGKTDAECPDQEMPTRARLLRKRGKTRKFKYSWKSAGHPSIWKRIADGKNQSCKQYTPCGCQSMCGKQCPCLHNGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPKRGDGQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNPVNKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNCYAKVMLVAGDHRVGIFAKEHIEASEELFYDYRYGPDQAPAWARKPESSKRDESAASQGRAKKHQSH 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0288 880 MobiDBLite consensus disorder prediction 344 374 - -
Lele15g0288 880 MobiDBLite consensus disorder prediction 347 374 - -
Lele15g0288 880 CDD SET_EZH 731 847 - -
Lele15g0288 880 Pfam CXC domain 670 701 IPR041355 -
Lele15g0288 880 SMART CXC_2 666 703 IPR033467 -
Lele15g0288 880 MobiDBLite consensus disorder prediction 853 880 - -
Lele15g0288 880 ProSiteProfiles CXC domain profile. 618 717 IPR026489 -
Lele15g0288 880 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 880 IPR025778 GO:0031519
Lele15g0288 880 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 22 879 IPR045318 GO:0006338|GO:0018024
Lele15g0288 880 Pfam SET domain 742 845 IPR001214 GO:0005515
Lele15g0288 880 MobiDBLite consensus disorder prediction 561 580 - -
Lele15g0288 880 SMART set_7 731 852 IPR001214 GO:0005515
Lele15g0288 880 ProSiteProfiles SET domain profile. 731 846 IPR001214 GO:0005515
Lele15g0288 880 MobiDBLite consensus disorder prediction 857 873 - -
Lele15g0288 880 Gene3D SET domain 632 848 IPR046341 -
Lele15g0288 880 FunFam Putative histone-lysine N-methyltransferase EZH2 632 848 - -
Lele15g0288 880 SUPERFAMILY SET domain 602 851 IPR046341 -
Lele15g0288 880 MobiDBLite consensus disorder prediction 561 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0288 Lele-ChrLele15 1627554 1633631 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0288 720 849 C2H2 Transcription Factor Family AT2G23740 26.531 2.88e-09 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele15g0288 SET 3e-10 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2124 13 28035956 28042060 Lele15g0288 15 1627554 1633631 hybridization
Lele14g2048 14 26368387 26374678 Lele15g0288 15 1627554 1633631 hybridization