Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0285 ATGGACGGTAGTACCTCGCCTAAACTTGAGCCAGAAGCATCTCCAGCTCCCACGCCAGAAATTCAAGAATCCAAAAAAAGGAAAATCGTTCAGAAAACAGTCGTGAGGGTGAAAGTTGGAGAAAATGTTAGTAAACTGAAGAATGAAGGGCTACCATCGGACTCATGGTCTTGGAGGAAATATGGACAAAAACCTATTAAAGGATCTCCTTATCCAAGAGGCTATTACAAATGTAGCACATCCAAAGGTTGTTCGGCCAAAAAGCAAGTAGAGAGGTGTAGAACAGATGCTTCAATGCTCATTGTTACCTATACTTCTTCCCATAACCATCCAGCTCCAGAATTCAAAGAATCAAAAACTCAAGCTACCGAAGATCTCTCACCTAATACTTCAAAGGAGAAAGAGCAAGACCGAGAGGAAGAGAAGAAAGATCTTCAACTTGCAACATGTGCAAATGAAGAAAATTTTCATTACCTGCGATCGCCGATAGGCTGTTCTGAAGACATTATTATTGACCAAGAGGATCTTTTCAAATTGAACCCATTGAAAACGCAAGAGAGGATAGATCTTCTCTTAGAGGAAGAGCCGCTCTGTTATTCTCAGCACAAGAACCCCTCAAAGCTCAAATCGGAGCAACTCGACTTCTTCGACGAGCTTGAAGAGTTACCCATGTCTCCGTCGTTGTTGAACATGATGAGGAAAAATTTTTCCGACGAAAGGATTCCGGTTGCCCCGTCATGA 741 0.4238 MDGSTSPKLEPEASPAPTPEIQESKKRKIVQKTVVRVKVGENVSKLKNEGLPSDSWSWRKYGQKPIKGSPYPRGYYKCSTSKGCSAKKQVERCRTDASMLIVTYTSSHNHPAPEFKESKTQATEDLSPNTSKEKEQDREEEKKDLQLATCANEENFHYLRSPIGCSEDIIIDQEDLFKLNPLKTQERIDLLLEEEPLCYSQHKNPSKLKSEQLDFFDELEELPMSPSLLNMMRKNFSDERIPVAPS 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0285 246 MobiDBLite consensus disorder prediction 128 144 - -
Lele15g0285 246 Pfam WRKY DNA -binding domain 54 111 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele15g0285 246 MobiDBLite consensus disorder prediction 106 144 - -
Lele15g0285 246 SMART WRKY_cls 52 112 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele15g0285 246 ProSiteProfiles WRKY domain profile. 47 113 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele15g0285 246 MobiDBLite consensus disorder prediction 1 28 - -
Lele15g0285 246 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 11 228 IPR044810 GO:0003700
Lele15g0285 246 FunFam WRKY transcription factor 65 32 113 - -
Lele15g0285 246 Gene3D WRKY domain 36 114 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele15g0285 246 MobiDBLite consensus disorder prediction 46 68 - -
Lele15g0285 246 SUPERFAMILY WRKY DNA-binding domain 49 113 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0285 Lele-ChrLele15 1615986 1616965 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0285 24 228 WRKY Transcription Factor Family AT4G01250 40.777 1.59e-40 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele15g0285 WRKY 2e-24 CL0274