Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0282 ATGTCGGTCCTCCCAGTTTCTATCTCAATTGGTGCCTTAGAAGTAATTTACCCTCTGTTGCTGAAATGGTTGCTTGTATTATCTTGCTCAGTATTAATGGCTGACTCTAGTGCATTATCTCCGGCTAGACCGCCTTCTACTACTATGGTTGTTCGTGATCTGCCACTACCAGCAAATCTCCATGGGCAAAAGCATCTACCATCCCATGGTGTACCAATTCCAACACCATCCCCTACCCATCCTCCTTTATATAGTCCATCCTTGAGTACAGGTCACCCCCCGGCAAGTTCACATTCATCAAAGCCATTCATGAAGGGCGGTGAATTAGGACCTCATGTTTCTGGTTTCGGAGATATTGCCCCTATTCATTCATCAGCTGGTGCGATTCCTTCTGGTTTGGCTCAGCCACCCTTATCTCCTTATGTTTCCTATTGTTGTAAACAAAATACGGTGTTGAAGCGTGGGAGCAAGAGTTGTCACTGTGTGTATCCCATAAAACTAGACCTTCTTCTTTTGAATGTCTCTCAAAACTCTAATTGGAATCTTTTTCTAGACGAATTAGCTACCCAACTTGGGTTGCAAAATTCTCAGATTGAATTGGTAAATTTTTATGTACTCACCTTATCAGCATTAAATATATCAATGGATATCACTCCACATAAAGGGACCAGTTTCTCTGCCAATGAAGCATCTAGAATAAACTCTTCGCTTTCATTGCATAAGATTCAACTAGATCCTAGATTGGTGGGTGACTACAAACTTCTCAATTTGACGTGGTATGAGCCTCCACCTGCATCTCAAGCTCCGAAGTCTGTTGCATCACCTATGAAAGCTCCTAGTTACCACAAACCAGCAACTTCAACACCAAGTGCTTCAAATAGGAGAGGACATTCAAGTTTGTATGCTATTCTTGGAATTGGTGCTGGCATACTCTTCATTGCCATTATATCTCTACTCGTACTTTGTTTATGCACATTGAGGCCTAAGACCAAAGGACCATCAATAGATACTGTGTTTTCTCTCGGTCCTATAGAGAAGCCAAGGATAGAAGGTGCAGTTTCAGCTGCAGGGTCTTTTCCTCATCCTACCAGCACTAGATTTATTGCTTATGAAGAACTTAAAGAAGCAACAAACAACTTTGAAGCAGCAAGCTTACTTGGAGAAGGTGGGTTCGGTAGAGTTTTTAAAGGCGTCTTAAATGATGGTACGGCCGTAGCAATTAAGAGGCTTACTAATGGAGGGCAACAAGGGGATAAAGAGTTTTTGGTTGAGGTTGAGATGCTTAGTCGGTTGCATCATCGTAATCTTGTAAAATTGGTGGGATACTATAGCAATCGTGACTCATCACAAAATCTATTATGCTATGAGCTTGTTCCAAATGGAAGTTTGGAGGCGTGGCTTCATGGTCCCTTAGGAATAAATTGTCCTTTGGATTGGGATACCAGAATGAAGATCGCACTTGATGCTGCAAGAGGACTTGCCTACTTGCATGAAGACTCACAGCCCTGTGTTATACACAGAGATTTCAAGGCGTCCAACATATTACTGGAAAACAACTTCCATGCTAAAGTTGCAGATTTTGGTCTTGCTAAGCAGGCACCTGAAGGCAGAGCAAATTACCTGTCTACTCGTGTCATGGGCACATTTGGGTATGTAGCTCCTGAGTATGCCATGACAGGTCACCTACTTGTTAAAAGTGACGTTTATAGCTATGGGGTTGTCTTGCTGGAACTGCTGACTGGAAGGAAACCTGTTGATATGTCACAGCCAGCTGGACAAGAGAACCTGGTTACTTGGGCAAGGCCAATCCTAAGAGATAAAGACCGGTTGGAAGAGCTTGCTGATCCAAGGCTGGGAGGGAAATATCCGAAGGAAGATTTTGTGCGGGTTTGTACTATTGCTGCAGCCTGCGTCGCTCCTGAAGCAAGCCAACGACCCACAATGGGGGAAGTGGTACAGTCACTTAAAATGGTGCAGCGCATGCCCGAACATCAGCATTCCATGGTGGCCTCCTCCAATACAAGGACTAACCTAAGACAGTCCTCTACCACTTTCGAGTCCGATGGGACGTCTTCTATGTTCTCTTCAGGTCCCCACTCTGGTCTAAGTGTCTTCGACAATGACAACGTTTCTAGGACGGCAGTTTTCTCTGAAGATCTTCATGAAGGAAGATGA 2175 0.44 MSVLPVSISIGALEVIYPLLLKWLLVLSCSVLMADSSALSPARPPSTTMVVRDLPLPANLHGQKHLPSHGVPIPTPSPTHPPLYSPSLSTGHPPASSHSSKPFMKGGELGPHVSGFGDIAPIHSSAGAIPSGLAQPPLSPYVSYCCKQNTVLKRGSKSCHCVYPIKLDLLLLNVSQNSNWNLFLDELATQLGLQNSQIELVNFYVLTLSALNISMDITPHKGTSFSANEASRINSSLSLHKIQLDPRLVGDYKLLNLTWYEPPPASQAPKSVASPMKAPSYHKPATSTPSASNRRGHSSLYAILGIGAGILFIAIISLLVLCLCTLRPKTKGPSIDTVFSLGPIEKPRIEGAVSAAGSFPHPTSTRFIAYEELKEATNNFEAASLLGEGGFGRVFKGVLNDGTAVAIKRLTNGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSNRDSSQNLLCYELVPNGSLEAWLHGPLGINCPLDWDTRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRANYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPAGQENLVTWARPILRDKDRLEELADPRLGGKYPKEDFVRVCTIAAACVAPEASQRPTMGEVVQSLKMVQRMPEHQHSMVASSNTRTNLRQSSTTFESDGTSSMFSSGPHSGLSVFDNDNVSRTAVFSEDLHEGR 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0282 724 MobiDBLite consensus disorder prediction 666 706 - -
Lele15g0282 724 MobiDBLite consensus disorder prediction 65 104 - -
Lele15g0282 724 ProSiteProfiles Protein kinase domain profile. 380 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g0282 724 Pfam Protein tyrosine and serine/threonine kinase 383 655 IPR001245 GO:0004672|GO:0006468
Lele15g0282 724 PANTHER OS01G0750732 PROTEIN 143 682 - -
Lele15g0282 724 MobiDBLite consensus disorder prediction 265 294 - -
Lele15g0282 724 Gene3D Phosphorylase Kinase; domain 1 362 457 - -
Lele15g0282 724 FunFam Receptor-like serine/threonine-protein kinase ALE2 360 457 - -
Lele15g0282 724 Gene3D Transferase(Phosphotransferase) domain 1 458 682 - -
Lele15g0282 724 SUPERFAMILY Protein kinase-like (PK-like) 358 658 IPR011009 -
Lele15g0282 724 FunFam Receptor-like serine/threonine-protein kinase ALE2 458 675 - -
Lele15g0282 724 ProSitePatterns Serine/Threonine protein kinases active-site signature. 504 516 IPR008271 GO:0004672|GO:0006468
Lele15g0282 724 ProSitePatterns Protein kinases ATP-binding region signature. 386 408 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0282 Lele-ChrLele15 1599773 1605223 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0282 19 724 Receptor kinase-like Gene Family AT4G02010 68.201 0.0 969
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Lele15g0282 Pkinase 2e-44 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0354 07 1977083 1977733 Lele15g0282 15 1599773 1605223 CCT
Lele08g0158 08 978361 978996 Lele15g0282 15 1599773 1605223 CCT
Lele15g0282 15 1599773 1605223 Lele05g0343 05 1945669 1952940 CCT
Lele15g0282 15 1599773 1605223 Lele06g0162 06 976751 984770 CCT
Lele15g0282 15 1599773 1605223 Lele07g0361 07 2003319 2010565 CCT
Lele15g0282 15 1599773 1605223 Lele08g0165 08 1007828 1015368 CCT
Lele13g2129 13 28065575 28068867 Lele15g0282 15 1599773 1605223 hybridization
Lele14g2054 14 26396476 26401957 Lele15g0282 15 1599773 1605223 hybridization