Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0276 ATGCGTGTCAAGACGGAGGAAGCAGCTGGATCCACTTCGTTTGGGGATCATAATTCAAACAGTTTCCCACTTTCGAGTGTCTTTGATTTTCATGAAGTGGAAAAGAGCTCTTTAGGGTTTATGGAGTTACTGGGTGTGCGGGAGCTGGACTATGGTTCCTCGCTGGATTTGCCCCCGCAACTATTTCCTTATGACCTCAAAAATCAGTGTGCCACCGCAGAAAGCTTCTGCGAGCCGTTGAATCAACAGCCTGCCACTCCAAACTCTTCATCCATTTCATCTGCTTCCAGTGAGGCAGTCATTGATGAACACGCTAAAACTGTAGATCAACGAGGAGATGAACCGCCAAAGACCAAGAACCAGTTGAAGGCAAAGAAGACAAATAAGAAGAAACAGAGGGAACCGAGATTCGCGTTCATGACCAAAAGCGAGGTGGATCATCTGGATGATGGGTACAGATGGAGAAAGTACGGTCAAAAAGCTGTAAAGAACAGCCCCTTTCCCAGAAGCTACTACCGTTGCACCTGTGCTTCATGTAATGTGAAGAAACGAGTGGAACGATCCTTCACTGATCCAAGCATTGTTGTCACGACCTACGAAGGCCAACACACACATCCGAGCCCACTCATGCCTCGATCGACTCTCGCCGGAGCTTTGGTACCAGCGGTGGTCTCCGCCGGATGTGGTTCAGCCTCAATATCGGGAAACTTATCTCAACAGTATCATGAGCAGCTCCAACATCATGATCGTCAATTCCTAGCTAACACATTGTCGTCTTTGGGTTTTCCTCGCATTTGCGGTTCAAAGAATGATATTGCCGCTTTTCCTCAGGACAGAATGCCTTGTAATCCAGGGACCGATGCTTTTTTAAGGGACCGTGGGCTACTCCAGGACATTATCCCTTCCCATATGTTGAAAGAAGAGTAG 927 0.4779 MRVKTEEAAGSTSFGDHNSNSFPLSSVFDFHEVEKSSLGFMELLGVRELDYGSSLDLPPQLFPYDLKNQCATAESFCEPLNQQPATPNSSSISSASSEAVIDEHAKTVDQRGDEPPKTKNQLKAKKTNKKKQREPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPFPRSYYRCTCASCNVKKRVERSFTDPSIVVTTYEGQHTHPSPLMPRSTLAGALVPAVVSAGCGSASISGNLSQQYHEQLQHHDRQFLANTLSSLGFPRICGSKNDIAAFPQDRMPCNPGTDAFLRDRGLLQDIIPSHMLKEE 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0276 308 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 82 238 IPR044810 GO:0003700
Lele15g0276 308 ProSiteProfiles WRKY domain profile. 143 208 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele15g0276 308 FunFam WRKY transcription factor 57 134 208 - -
Lele15g0276 308 Gene3D WRKY domain 132 209 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele15g0276 308 SUPERFAMILY WRKY DNA-binding domain 140 208 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele15g0276 308 MobiDBLite consensus disorder prediction 105 121 - -
Lele15g0276 308 PIRSF WRKY_txn_fact_IIc 1 308 IPR017396 GO:0003700
Lele15g0276 308 Pfam WRKY DNA -binding domain 149 206 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele15g0276 308 MobiDBLite consensus disorder prediction 105 133 - -
Lele15g0276 308 SMART WRKY_cls 148 207 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0276 Lele-ChrLele15 1557614 1558926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0276 14 308 WRKY Transcription Factor Family AT2G47260 46.765 2.61e-66 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele15g0276 WRKY 3.1e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0151 06 931350 934082 Lele15g0276 15 1557614 1558926 CCT
Lele13g2137 13 28115207 28116535 Lele15g0276 15 1557614 1558926 hybridization
Lele14g2063 14 26443756 26444537 Lele15g0276 15 1557614 1558926 hybridization