Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0272 ATGCTTGCCAAAACTCGCATCCAATTTATCCTGCTGCTTCTTTCATCTTTGTGCGGCTCTTGCAAGCCTTCCTCTTGGAACTCACATAAGCGCTCAGATTATGAGGATTGGATTTCTTGGAACCTCCAGAATTACCGGAAGGTGACGCTTCTGAAGACCCAATGGAATGTGAAAGCACCTGATCTGAAGCAGGGGATTGCTGAGAGTAACAGAGTTAATATCACTGTTCGCCAAGACGGTACCGGTGACTTCACCACCATCAGACAAGCGCTGGATAGCATTCCACCTCGCAACATCAGAAGAGTCATAGTTTCGATTGCACCGGGCGTTTATAGGGAGAAGATTGGGATACCCAGAAATATGCACTTCATAACATTGTTAGGGGACGCTACAAATCCGCCAACTATTACATGGAACGATACGGCATCGATCATTGGGAGAGATGGGATACCATTTGGCACATTCCACAGTGCCACCGTTGCTGTGGATGCTAACTATTTTGTTGCCGTCAACATCAAATTTGAGAACACGGCCTGGCATGAGGTAGGAAAGGCGGGAGGGCAAGGCGTGGCACTTCGCATCTCAGGGACCAAAGCAGCATTTTACAACTGCAGCTTCTATGGGGATCAAGACACGCTCTACGACCACAGAGGACTTCACTACTTCAACAATTGCTTCGTTCAAGGCTCCGTTGATTTCATCTTCGGCTCCGGCAGATCCCTTTACGAGAACTGCTATCTAAAGTCAATAGCGAAGAAGGCGGTGTCGATCACGGCTCAAAAGCGCACGAATGCGTCGTTAGAGAGCGGGTTTTCGTTCAAGAATTGCGTGATAACGGGGACTGGGCAAGTTTATCTGGGAAGAGCGTGGGGTGATTATTCCAGGGTTGTTTTCTCGTACACCTTCATGGACAAGATTGTTGTGCCCCAGGGCTGGACTGACTGGGGTGACCAAAAGCGCGACTCGAGGGTGTATTATGGAGAATACAAGTGCAGTGGGCCTGGGGCTAACTTGACTGCAAGAGTGGCGTGGGCTCACATACTCACCGACAAAGAGGCTCAGCCTTTTCTCGGAGCTCATTACATTGAAGGCGACACTTGGCTCTTTCCCCTCACCGTTTGA 1122 0.4947 MLAKTRIQFILLLLSSLCGSCKPSSWNSHKRSDYEDWISWNLQNYRKVTLLKTQWNVKAPDLKQGIAESNRVNITVRQDGTGDFTTIRQALDSIPPRNIRRVIVSIAPGVYREKIGIPRNMHFITLLGDATNPPTITWNDTASIIGRDGIPFGTFHSATVAVDANYFVAVNIKFENTAWHEVGKAGGQGVALRISGTKAAFYNCSFYGDQDTLYDHRGLHYFNNCFVQGSVDFIFGSGRSLYENCYLKSIAKKAVSITAQKRTNASLESGFSFKNCVITGTGQVYLGRAWGDYSRVVFSYTFMDKIVVPQGWTDWGDQKRDSRVYYGEYKCSGPGANLTARVAWAHILTDKEAQPFLGAHYIEGDTWLFPLTV 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0272 373 ProSitePatterns Pectinesterase signature 2. 227 236 IPR033131 -
Lele15g0272 373 Gene3D - 68 372 IPR012334 -
Lele15g0272 373 Pfam Pectinesterase 73 365 IPR000070 GO:0030599|GO:0042545
Lele15g0272 373 FunFam Pectinesterase 69 370 - -
Lele15g0272 373 SUPERFAMILY Pectin lyase-like 72 371 IPR011050 -
Lele15g0272 373 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 65 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0272 Lele-ChrLele15 1529410 1531059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0272 66 370 Carbohydrate Esterase AT5G47500 44.625 6.64e-90 273