Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0271 ATGACAGGCGTAGGCATATATTTAGAAATATGGCAAAAAAGAGAGAAGGAAAGTAGAGATTATTGGGACTGTGATAGAGCGAGAGAATGGGACAAGTGTATGGAGATGGCTTTTGCTTTAACGAATGAAGTCAAGTTTGACTCAGAATTTAAGGCAGAAGTTTGCCTTCCAGTTAAAGCTCAGACAGCGACTGGGAGTGACCCTGCATCTACTCCTAAAAGATGCCATGCCACCCTCGACTCATCCCTATATAACCATCCTTCTTGTCTACCACTCGCTGACAATCCAAGCGAAAGCATTCATTCCCCGAACTACCTCTCTCTGCAAAAGGGTTCTATGGAACATCAAGTGTTTGGTTATTGTGAGATGAATATCAAGTATTGGGGTGGTGAGATGGTGGGAAGCATGTCAGGTTGTGGGTCATTGGGAAGTGAAGAAGAGATGGGGATAAGGAAAGGGCCGTGGACAGAGGAAGAGGACGCTATTCTGGCTAACTACATATCCCTCCACGGCGAAAGACACTGGAACTCTCTCGCTCGCTCAGCAGGTCTGAAGCGAACGGGGAAAAGCTGCAGATTAAGATGGCTGAACTACCTGCGTCCTGATGTCCGGCGTGGCAATATAACCCTCCAAGAGCAGCTCTTAATCCTCGATCTCCATTCCCGATGGGGCAACAGGTGGTCGAAGATAGCGCAAGAGCTGCCTGGGAGAACGGACAACGAGATAAAGAACTATTGGAGGACGCGAGTGGTGAAGCAGGCCAGACAAATGAAATGTGATGTGAATAGCAAACAGTTTAGAGACGCATTGCGTTTCGTATGGATTCCTCGCATGGTGGAGCGCATCCAAGCCTCGTCGTCTCAAACGGCATCACCCTGCCACTACAACTCAGCTACTCCTCTCTCTGATCGTTCAATAATGGAGGCCAGTGGTGACGATAGAGACGCCTGCAGCTCTGGTAATCATCGCTTGGAATGTTCGCCAGAATTCCAAGCATTTGAAGAGGGCAATGCAGATTTGTGGACCTACGAAAACATATGCTTCTTGCAACAACAGCTTGCGGATGACTCGTGA 1074 0.4823 MTGVGIYLEIWQKREKESRDYWDCDRAREWDKCMEMAFALTNEVKFDSEFKAEVCLPVKAQTATGSDPASTPKRCHATLDSSLYNHPSCLPLADNPSESIHSPNYLSLQKGSMEHQVFGYCEMNIKYWGGEMVGSMSGCGSLGSEEEMGIRKGPWTEEEDAILANYISLHGERHWNSLARSAGLKRTGKSCRLRWLNYLRPDVRRGNITLQEQLLILDLHSRWGNRWSKIAQELPGRTDNEIKNYWRTRVVKQARQMKCDVNSKQFRDALRFVWIPRMVERIQASSSQTASPCHYNSATPLSDRSIMEASGDDRDACSSGNHRLECSPEFQAFEEGNADLWTYENICFLQQQLADDS 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0271 357 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 204 254 IPR017930 -
Lele15g0271 357 FunFam MYB transcription factor 209 272 - -
Lele15g0271 357 FunFam Myb transcription factor 152 204 - -
Lele15g0271 357 SUPERFAMILY Homeodomain-like 148 246 IPR009057 -
Lele15g0271 357 ProSiteProfiles Myb-like domain profile. 147 199 IPR001005 -
Lele15g0271 357 CDD SANT 154 199 IPR001005 -
Lele15g0271 357 Gene3D - 152 204 - -
Lele15g0271 357 Gene3D - 209 250 - -
Lele15g0271 357 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 147 203 IPR017930 -
Lele15g0271 357 CDD SANT 209 248 IPR001005 -
Lele15g0271 357 Pfam Myb-like DNA-binding domain 152 199 IPR001005 -
Lele15g0271 357 Pfam Myb-like DNA-binding domain 205 248 IPR001005 -
Lele15g0271 357 SMART sant 151 201 IPR001005 -
Lele15g0271 357 SMART sant 204 252 IPR001005 -
Lele15g0271 357 ProSiteProfiles Myb-like domain profile. 200 250 IPR001005 -
Lele15g0271 357 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 147 303 IPR044676 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0271 Lele-ChrLele15 1523872 1526585 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0271 145 290 MYB Transcription Factor Family AT2G47190 73.288 2.75e-77 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele15g0271 Myb_DNA-binding 3.8e-15 CL0123