Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0270 ATGAAGGTGGAAGGCGAGAGTAAGAGGAAGAAACATGAGAGTGAGGATGAGATGGGCCTAAGGAGGGGTCCATGGACTGTGGAAGAGGACACCATTCTGGTCAATTACATCGCCATCCACGGCGAAGGTCGCTGGAAATCCGTCGCCCGCTGTGCCGGCACGTACTCTGTTCCTTCTCGCTGCATGATTGCGCCTTCAAAAACGTGCAAGAGTTGCAGATTAAGGTGGCTGAACTACTTGCGTCCCGGCGTTCGGCGTGGGAATATCACACTGCAGGAACAGATAGTAATTCTCGATCTGCACTCTCGGTGGGGAAATAGGTGGTCGAAAATAGCGCAGCACTTGCCAGGAAGAACAGACAATGAGATTAAGAATTACTGGAGGACGAGGGTGATGAAGCAGGCGAAGCACCTCAAGTGCGATGTCAACAGCAAGCAGTTCAGGGACACCATGCGTTACGTGTGGATGCCCCGCCTGCTGGAGCGGATACGGGCGGCCGCATCCGACCACGACCCGAACTGTCAACCCATCCCCATCAACCCGAATCACTCCTCCGTCACGCCTCTCGATATGCAGTTCCACCAAGCCCCCTCTTCTCCATGGGAGGTTCGGCATGTTTCGGACGGTTCCCCGACCGGGTCAGAAGTTTGCCCGCAGGCCGTGTCGGAGCAGGGAAATAATGCCCTGGGTGGTGGTGGTGGGGAGTGGGCGGAAACATTGTGGAGCGACGACAACATTTGGTTTTTGCAGCAACAACTTTTCCAAGATGCGTGA 774 0.553 MKVEGESKRKKHESEDEMGLRRGPWTVEEDTILVNYIAIHGEGRWKSVARCAGTYSVPSRCMIAPSKTCKSCRLRWLNYLRPGVRRGNITLQEQIVILDLHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVMKQAKHLKCDVNSKQFRDTMRYVWMPRLLERIRAAASDHDPNCQPIPINPNHSSVTPLDMQFHQAPSSPWEVRHVSDGSPTGSEVCPQAVSEQGNNALGGGGGEWAETLWSDDNIWFLQQQLFQDA 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0270 257 CDD SANT 90 129 IPR001005 -
Lele15g0270 257 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 80 IPR017930 -
Lele15g0270 257 SMART sant 85 133 IPR001005 -
Lele15g0270 257 SMART sant 21 82 IPR001005 -
Lele15g0270 257 ProSiteProfiles Myb-like domain profile. 81 131 IPR001005 -
Lele15g0270 257 CDD SANT 24 80 IPR001005 -
Lele15g0270 257 ProSiteProfiles Myb-like domain profile. 17 80 IPR001005 -
Lele15g0270 257 MobiDBLite consensus disorder prediction 1 20 - -
Lele15g0270 257 SUPERFAMILY Homeodomain-like 19 127 IPR009057 -
Lele15g0270 257 FunFam MYB transcription factor 90 153 - -
Lele15g0270 257 Gene3D - 23 85 - -
Lele15g0270 257 Gene3D - 90 131 - -
Lele15g0270 257 Pfam Myb-like DNA-binding domain 86 129 IPR001005 -
Lele15g0270 257 Pfam Myb-like DNA-binding domain 22 80 IPR001005 -
Lele15g0270 257 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 18 176 IPR044676 GO:0003700|GO:0006355|GO:0043565
Lele15g0270 257 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 81 135 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0270 Lele-ChrLele15 1522855 1523812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0270 15 257 MYB Transcription Factor Family AT2G47190 48.315 5.01e-76 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele15g0270 Myb_DNA-binding 1.1e-13 CL0123