Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0256 ATGAAAGGGATGAGTGACAGAATCGCAGCGACTGAACTACATTTGTATCAATTGTCACTCCACATCTTGAGCCCAACCTTTCAGTTGTGTTCAAGTACCGGCTTGGTTCAATCTTTAGCTGCGTCCTTGCCCATCATCCGCTGGTTTGAGCAAGTAGGGAACAATCTTCGGAGAAAGATTTCACTTGACTTACTCGTTCCTCTCCAGCTTGAGAAATGGAGGAGACCTTTCTTTTCACATCTGAATCTGTCAACGAGGGACCCTGACAGCAAGGTTGCCTGTGAGACATGCACCAAGACCGACATGGTCATGGTCTTTGGAGAGATTACAACCAAGGCCAATGTAGATTATGAGAAGATTGTCCGCAATACATGCCGTAGCATTGGATTTGTCTCTGATGATGTGGGTCTTGATGCTGACAAATGCAATGTATTGGTTAACATTGAGCAGCAGAGCCCTGACATTGCCCAGGGCGTGCACGGCCACTTTACTAAGCGTCCAGAGGAGGTTGGTGCTGGTGATCAGGGTCACATGTTTGGGTATGCCACCGATGAAACCCCTGAATTCATGCCCTTGAGCCATGTTCTTGCAACTAAATTAGGAGCTCGCCTTACGGAGGTTAGGAAGAATGGCACCTGCGCTTGGCTGAGACCAGATGGCAAAACGCAAGTAACTGTTGAGTACTACAATGACAATGGGGCTATGTTTCCAGTTCGTGTCCACACTGTCCTTATTTCTACTCAGCATGACGAGACTGTCACTAATGATCAAATTGCTGCTGATCTTAAGGATCATGTTATCAAGCCCGTCATCCCTGAGAAATACCTAGACGACAAGACCATCTTTCACCTCAACCCCTCTGGCCGCTTTGTCATTGGTGGCCCTCATGGGGATGCTGAATACAATCTTTCGTTTCAAAGCAAGTCAAGAGGCTCAGGCGCTTTATCCTACGCACTTCCTCTGCGCAATTTTCGCCGGTTTTGGAGCCAAGATCTTCATCAACGCCTTCGTCCACTTAGTTTCCAGCTCTCTGATCTCTCAACTCCAGCATATTGCCATTTGCTTTTAGAACGAATCATGAGTTGTTTCAGCTGTTGCGAAGAGGATGAACTCCACAAAGCTGCTGAGAGTGGAGGACCATACGTGGTAAAAAACTCAACAGGAAACGATGGAAATTATCATGCTTCTGAAACTGCAAAGCAGGGTGCTCAGACTGTTAAAGTCCAGCCCATTGAAGTTCCTGCCATATCAGCAGATGAATTAAAAGAAATTACAGATAATTTTGGGACAAATTCTCTGATTGGGGAGGGGTCCTATGGAAGAGTATATTATGGCGTTCTTAAAAATGGTCTGGCTGCAGCAATCAAGAAGTTAGATGCTAGTAAACAACCTGATGATGAGTTTTTAGCCCAGGTTTCCATGGTATCAAGGCTGAAGCATGAAAATTTTGTTCAATTACTTGGTTATTGTGTTGATGGAAGTTCCCGCGTTCTTGTTTATGAGTTTGCATCTAATGGATCTCTTCACGACATTTTACATGGCAGAAAAGGTGTTAAAGGAGCCCAACCTGGTCCTGTCCTGTCATGGGCACAGAGAGTAAAGATTGCTGTAGGAGCTGCAAAAGGGCTTGAGTATTTGCATGAGAAGGCTGATCCTCACATTATCCACCGAGACATCAAATCAAGCAATGTACTGATTTTTGATGATGATGTTGCTAAGATTGCAGATTTTGATTTGTCAAATCAGGCTCCTGATATGGCTGCGCGTCTTCATTCCACTCGTGTCCTTGGAACCTTTGGTTATCATGCACCTGAATATGCAATGACTGGACAACTGAATGCTAAAAGTGATGTATACAGCTTTGGCGTTGTCCTTCTGGAACTTTTGACTGGAAGGAAGCCTGTTGATCATACACTACCTCGTGGACAGCAGAGCCTGGTTACTTGGGCTACACCAAAACTCAGTGAAGATAAAGTCAGGCAGTGTGTTGATACAAGACTAGGAGGAGATTACCCACCCAAAGCTGTTGCTAAGATGGCTGCTGTTGCAGCGCTATGCGTGCAATATGAAGCTGACTTCAGACCAAACATGAGCATTGTAGTCAAAGCTCTTCAACCTTTGTTGAATGCACGACCTGGACCTGCTGGTGAAACTCCAAATTGA 2163 0.4526 MKGMSDRIAATELHLYQLSLHILSPTFQLCSSTGLVQSLAASLPIIRWFEQVGNNLRRKISLDLLVPLQLEKWRRPFFSHLNLSTRDPDSKVACETCTKTDMVMVFGEITTKANVDYEKIVRNTCRSIGFVSDDVGLDADKCNVLVNIEQQSPDIAQGVHGHFTKRPEEVGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNDNGAMFPVRVHTVLISTQHDETVTNDQIAADLKDHVIKPVIPEKYLDDKTIFHLNPSGRFVIGGPHGDAEYNLSFQSKSRGSGALSYALPLRNFRRFWSQDLHQRLRPLSFQLSDLSTPAYCHLLLERIMSCFSCCEEDELHKAAESGGPYVVKNSTGNDGNYHASETAKQGAQTVKVQPIEVPAISADELKEITDNFGTNSLIGEGSYGRVYYGVLKNGLAAAIKKLDASKQPDDEFLAQVSMVSRLKHENFVQLLGYCVDGSSRVLVYEFASNGSLHDILHGRKGVKGAQPGPVLSWAQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDTRLGGDYPPKAVAKMAAVAALCVQYEADFRPNMSIVVKALQPLLNARPGPAGETPN 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0256 720 SUPERFAMILY Protein kinase-like (PK-like) 407 704 IPR011009 -
Lele15g0256 720 ProSitePatterns Serine/Threonine protein kinases active-site signature. 554 566 IPR008271 GO:0004672|GO:0006468
Lele15g0256 720 Gene3D - 85 299 - -
Lele15g0256 720 FunFam PTI1-like tyrosine-protein kinase 3 392 502 - -
Lele15g0256 720 Pfam S-adenosylmethionine synthetase, N-terminal domain 85 153 IPR022628 GO:0004478|GO:0006556
Lele15g0256 720 Gene3D Phosphorylase Kinase; domain 1 389 502 - -
Lele15g0256 720 FunFam S-adenosylmethionine synthase 169 188 - -
Lele15g0256 720 Pfam Protein tyrosine and serine/threonine kinase 432 704 IPR001245 GO:0004672|GO:0006468
Lele15g0256 720 SUPERFAMILY S-adenosylmethionine synthetase 167 291 IPR022636 GO:0004478|GO:0006556
Lele15g0256 720 ProSiteProfiles Protein kinase domain profile. 428 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g0256 720 SMART serkin_6 428 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g0256 720 Gene3D - 192 294 - -
Lele15g0256 720 SUPERFAMILY S-adenosylmethionine synthetase 86 161 IPR022636 GO:0004478|GO:0006556
Lele15g0256 720 FunFam pto-interacting protein 1 504 715 - -
Lele15g0256 720 Gene3D Transferase(Phosphotransferase) domain 1 503 712 - -
Lele15g0256 720 CDD STKc_IRAK 434 707 - -
Lele15g0256 720 FunFam S-adenosylmethionine synthase 189 293 - -
Lele15g0256 720 ProSitePatterns S-adenosylmethionine synthase signature 1. 171 181 IPR022631 GO:0004478|GO:0006556
Lele15g0256 720 Gene3D - 169 191 - -
Lele15g0256 720 Pfam S-adenosylmethionine synthetase, central domain 170 290 IPR022629 GO:0004478|GO:0006556
Lele15g0256 720 ProSitePatterns Protein kinases ATP-binding region signature. 434 457 IPR017441 GO:0005524
Lele15g0256 720 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 363 710 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0256 Lele-ChrLele15 1446823 1457225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0256 416 705 Receptor kinase-like Gene Family AT4G02010 51.361 1.36e-87 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Lele15g0256 PK_Tyr_Ser-Thr 1.5e-46 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2155 13 28236255 28245063 Lele15g0256 15 1446823 1457225 hybridization
Lele14g2090 14 26571467 26572498 Lele15g0256 15 1446823 1457225 hybridization