Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0254 ATGAGAGGGAAATTAATTGTGTCTGCGGTCTCCCTCATCCTCGTGGTGGGGGTGGCGATCGGTGCGGTCGTAGTGGTTCACAACAAGAACAGTGACCCTCAGGTCACTGAACGTCAGAATGCGGTGAGGGCAATGTGCCAGAACACGGAGGACCAAAAGCTTTGCCACGACACTCTGGGCAACGTGCAGAACAGTTCAGACCCAAAAGCATTCTTAACCGCCGCCGTGGAAGCCTCTGTCAACAGCCTCATCAAGGCCTTGAACATAAGCGATAAGCTCAGCGTTGAACAAGGCAACAGCACCCCAGGCATCGTCAAGATGGCCACCAATGACTGCAAGGAGTTGCTCGAATTCGCCATGGATAGCCTCCAGGCCTCCAAGGACTTCCTGGGGAACAACAGCGTCCAAACCTTGAACGATCGATCCCCTGACTTCAAGAATTGGCTCGCTTCTGTAGTCTCTTACCAACTGGCTTGCATGGATGGGTTCGACGACAATGTCGACGGTGCCAAACAGATCAAGACTCAGCTTCAAGAGAATGGTTTGGACGACGTGGGGAAGCTCACCGGCATAGCCCTAGATATTATGGCTGATTTTGAAAACATCCTGGGTCAGTTTGGTTTGAAGCTGAAAGTGAACCCTGGTTCTCGTCGTCTTCTTCAGGTGGACAGCGCAGGCTATCCCACTTGGTTCTCAGCCGCTGATCGGAAGCTCTTGGACGTAAAGCCGAGGGGAAGGGGAAATCATATCAAGCCCAACGTGGTGGTGGCCCAGGATGGTAGTGGCCAGTTCAAGACCATCATGGACGCCGTTAACTCTTATCCTAAGGGTTTGCAAGGAAGATACATCATCCAAGTCAAGGCAGGCACATACCGTGAGTACGTCACGATTCCCAAGACAGCCGTCAATATCCTTATGTACGGTGCCGGCACTGATAAAACAGTCGTCACCGGTAATAGAAACAATGTTGATGGTTACACCACGAAGGACACGGCTACTTTCGTAAATCTTGGGAACGGGTTCATCGCCAAGTACATGACATTTGTGAATTCCGCTGGTCCTGAAAAGCACCAAGCAGTGGCATTTAGGAACCAGGGAGATATGTCGGCTGCATTCGATTGTTCCTTTGTGGGTTACCAGGACACGTTGTACGCTCAAACCAATCGTCAATTCTACAGGAATTGCGACATCTCAGGCACCGTGGACTTCATATTTGGAGTGTCCACCGTGTTGATCCAGAGCTCTAGAATCATCGTAAGGAAGCCAATGGACAACCAATTCAACACGGTGACGGCTGACGGCAGAAACATGCAGAACATGCCCACAGGGACAGTGATCCAGAACTGCGACATTGTTCCAGAGAATGCTCTCTTCCCCGTGAGGTTTAAGATCAGATCGTACCTGGGAAGGCCTTGGAAGCAGTATGCTAGAACTGTGGTGATGGAATCCAGAATAGCTGACTTCATTCAACCCGATGGGTGGACTCCATGGGAAGGAAGCTTTTTCCAGAAAACTTTATACTATGCAGAGTACAACAACGAAGGACCTGGTGCTAATGTGGCCAAGAGGGTTAAGTGGCCGGGTTACAAGGGCCTCATCAGTAAGGATGTTGCTGCCCAGTTCACCGCCGGCCAATTCCTCAAAGGTGGGCCCACTTCCCGATCTGAGGACTGGATGAAGCCCCTCCATCTTCCTTTTGACATTGGCTTCACCAAGCCTTGA 1722 0.5099 MRGKLIVSAVSLILVVGVAIGAVVVVHNKNSDPQVTERQNAVRAMCQNTEDQKLCHDTLGNVQNSSDPKAFLTAAVEASVNSLIKALNISDKLSVEQGNSTPGIVKMATNDCKELLEFAMDSLQASKDFLGNNSVQTLNDRSPDFKNWLASVVSYQLACMDGFDDNVDGAKQIKTQLQENGLDDVGKLTGIALDIMADFENILGQFGLKLKVNPGSRRLLQVDSAGYPTWFSAADRKLLDVKPRGRGNHIKPNVVVAQDGSGQFKTIMDAVNSYPKGLQGRYIIQVKAGTYREYVTIPKTAVNILMYGAGTDKTVVTGNRNNVDGYTTKDTATFVNLGNGFIAKYMTFVNSAGPEKHQAVAFRNQGDMSAAFDCSFVGYQDTLYAQTNRQFYRNCDISGTVDFIFGVSTVLIQSSRIIVRKPMDNQFNTVTADGRNMQNMPTGTVIQNCDIVPENALFPVRFKIRSYLGRPWKQYARTVVMESRIADFIQPDGWTPWEGSFFQKTLYYAEYNNEGPGANVAKRVKWPGYKGLISKDVAAQFTAGQFLKGGPTSRSEDWMKPLHLPFDIGFTKP 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0254 573 PANTHER PECTINESTERASE 18 560 - -
Lele15g0254 573 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 199 IPR035513 -
Lele15g0254 573 FunFam Pectinesterase 247 570 - -
Lele15g0254 573 CDD PMEI-like_3 44 197 - -
Lele15g0254 573 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 197 IPR035513 -
Lele15g0254 573 Pfam Pectinesterase 253 549 IPR000070 GO:0030599|GO:0042545
Lele15g0254 573 TIGRFAM PME_inhib: pectinesterase inhibitor domain 24 167 IPR006501 GO:0004857
Lele15g0254 573 Pfam Plant invertase/pectin methylesterase inhibitor 41 195 IPR006501 GO:0004857
Lele15g0254 573 SUPERFAMILY Pectin lyase-like 250 551 IPR011050 -
Lele15g0254 573 ProSitePatterns Pectinesterase signature 2. 397 406 IPR033131 -
Lele15g0254 573 SMART PMEI_2 37 195 IPR006501 GO:0004857
Lele15g0254 573 Gene3D - 247 569 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0254 Lele-ChrLele15 1437905 1439744 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0254 5 570 Carbohydrate Esterase AT3G05610 38.636 1.57e-134 405