Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0249 ATGGGTGAGAATGACTTGGATGGCGCGGTCGAGCATGATAAGGCAACCACATCACAGAATCACGCAGGAACCAGCACAAACGAGGAAAACGGAGAGATGGCTAAGCAAAAAAGAAAAGCCGAGACAGTTCCATTTCACAGGCTGTTCTCATTTGCGGATTCCACTGATACTCTGTTAATGATCGCCGGCAGCATTGGGGCCATTGGAAATGGTCTGGGTTTGCCTCTCATGGCGTTATTGATGGGCGAAATGATCAATGCTTTTGGAAGTAATCAGCGAAGCACGCACGTCGCAGCCCAAGTTTCCAAGGTTTCTTTGAAATTTGTGTACTTGGCGGTAGGAATGGGTGTGGCAGCAAGTCTTCGGGAAAGGCAGGCCGCGCGAATAAGGGGATTGTATATGAAAACCATACTGAGACAAGACGTTACTTTCTTCGATAAGGAAACAAACACCGGAGAGGTGGTCGGGAGAATGTCCGGTGATACTGTTCTCATACAGGACGCCATGGGAGAGAAGGTTGGCAAATTTCAGCAACTAGTTTCAACATTCCTCGGCGGTTTCGTGGTTGCATTTATAAAAGGATGGCTTCTTGCACTCGTCATGATGGCCACTCTTCCATTGCTTGCGATGGCCGGTGCATCCATGGCCTTCATCATAGGAAGAACGGCTTCCCGCGGTCAGACAGCTTACGCAAAAGCCGCAAACATCGTTGAACAAACTCTCGGCTCCATTAGAACCGTAAATTGTGAAAAGCAAGCGGTGTCTAATTACAGCAAATTTCTGGTGGATGCTTACAAGTCAGGAGTCCACGAAGGTTTTGTTGTCGGCCTGGGTTTCGGCATGGTTATGTTTGTCTTCTTCTGTGGTTATGCTTTGGCTGTATGGTTTGGCGCAAAGATGATACTGGAAAGAGGATACAACGGCGGTACGGTGATCAATGTGATTGTCGCTATATTAACCGCTTCCATGTCTCTTGGGCAGGCCACCCCTTGCTTGAGTGCTTTTGCGGCGGGTCAAGCTGCAGCTTATAAGATGTTCGAGACAATAGAGAGAAAGCCAGAAATAGACGCTTATGATCCAAACGGTAAAACATTAGAGGACATTAATGGCGACGTAGAGTTGAAGGGTGTTTACTTTAGTTATCCGACTAGACCCGAGGAGCTAATATTCAATGGGTTCTCTCTTCATATACCAAGCGGCACCACTGCGGCATTGGTCGGAGAGAGTGGAAGTGGCAAGTCAACAGTTATTAGCTTAATAGAAAGATTCTATGATCCACGGACAGGAACGCATTCGGGGTTGCTCAAGGATCCCGAGGGAGCTTACTCTCAGCTTATACGCTTGCAAGAAGTAAACAAAGAGTCAGAGGAACCTTCAGAGAGTCAAAACAAAAATGAAATTTCCCTAGAATCATTCAGACAATCGAGCCAAAGGAGGTCACTCCGAAGATCCATAAGTCGAGGATCATCTGTCGGCAATAGTAGCAGGCACTCATTTTCTGTACCATTTGGCATGCCCACTGTAGTTAACGTCCCTGAACCTCAACTTGAAAAATTAGACGCGAGAGAAGAATTGCCAGATGTTCCAATTCTTCGCCTCGCTTCCCTCAACAAGCCTGAAATTCCAGTGCTTCTGCTTGGATGTGTGGCTGCCGTAGTAGATGGTGCAATACTTCCGGTGTTTGGTTTGTTGGTTTCCTCTGTTATTAAAACATTCTACGAGCCACCTCATGAGATGACAAAGGATTCCAAGTTTTGGGCATTTATCTTTTTGGCCCTTGGCATTGCATCTCTGGTCGCAATTCCATCCCGAGGATACTTGTTTTCCGTAGCTGGCTGTAAGTTAATCCAACGCATCAGAATGATGTGTTTTGAGAAGGTTGTAAACATGGAGGTTGGTTGGTTTGACGAACCAGAGCACTCAAGCGGAGTAATAGGTGCAAGGCTCTCGGCAGATGCTTCGACGGTGCGAGCCCTTGTCGGTGATGCGCTAGGTCTTCTGATTCAAAATATAGCATCAGTGCTGACTGGTTTAGTTATTGCTTTCGTTGCGAGCTGGGAGTTAGCTTTAGTTATTCTGGTACTCATTCCCCTGATTGGGGTGAACGGATATGTTCAAATGAAATTCATGAAGGGTTTTAGTGCAGATGCAAAGATGATGTACGAAGAAGCGAGCCAAGTAGCTAATGATGCTGTTGGAAGCATCAGAACAGTAGCTTCTTTCTGTGCGGAAGAGAAGGTAATGGAACTGTATAGGAAGAAATGCGAAGGCCCCATGAAATCTGGGATACGGCTAGGCTTGATCAGTGGAACGGGATTTGGGGTTTTCTTTGCTCTGACAATGTCGGCAATGGCAGTTTCCCAGTTCAGCTCCATGGCTCCAGATTCCAGCAAAGCCAAGTCAGCCACTTCTTCCATATTTGGACTCATTGACAGGAAGTCCAAGATAGACTCCAGCGACGGATCGGGTGCCATGTTGGATAACGTGAAGGGAGAAATTGAGCTTCGTCATGTCAGCTTCAAATATCCATCGAGACCAGACATACAAATTTTCCGAGACCTCAGTTTGGCTATTCATTCGGGCAAGGCGAATCGGCTCGGAGGACGTGGCACAAGCTTGGAGTAA 2625 0.4693 MGENDLDGAVEHDKATTSQNHAGTSTNEENGEMAKQKRKAETVPFHRLFSFADSTDTLLMIAGSIGAIGNGLGLPLMALLMGEMINAFGSNQRSTHVAAQVSKVSLKFVYLAVGMGVAASLRERQAARIRGLYMKTILRQDVTFFDKETNTGEVVGRMSGDTVLIQDAMGEKVGKFQQLVSTFLGGFVVAFIKGWLLALVMMATLPLLAMAGASMAFIIGRTASRGQTAYAKAANIVEQTLGSIRTVNCEKQAVSNYSKFLVDAYKSGVHEGFVVGLGFGMVMFVFFCGYALAVWFGAKMILERGYNGGTVINVIVAILTASMSLGQATPCLSAFAAGQAAAYKMFETIERKPEIDAYDPNGKTLEDINGDVELKGVYFSYPTRPEELIFNGFSLHIPSGTTAALVGESGSGKSTVISLIERFYDPRTGTHSGLLKDPEGAYSQLIRLQEVNKESEEPSESQNKNEISLESFRQSSQRRSLRRSISRGSSVGNSSRHSFSVPFGMPTVVNVPEPQLEKLDAREELPDVPILRLASLNKPEIPVLLLGCVAAVVDGAILPVFGLLVSSVIKTFYEPPHEMTKDSKFWAFIFLALGIASLVAIPSRGYLFSVAGCKLIQRIRMMCFEKVVNMEVGWFDEPEHSSGVIGARLSADASTVRALVGDALGLLIQNIASVLTGLVIAFVASWELALVILVLIPLIGVNGYVQMKFMKGFSADAKMMYEEASQVANDAVGSIRTVASFCAEEKVMELYRKKCEGPMKSGIRLGLISGTGFGVFFALTMSAMAVSQFSSMAPDSSKAKSATSSIFGLIDRKSKIDSSDGSGAMLDNVKGEIELRHVSFKYPSRPDIQIFRDLSLAIHSGKANRLGGRGTSLE 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0249 874 SMART AAA_5 399 678 IPR003593 -
Lele15g0249 874 Gene3D - 430 462 IPR027417 -
Lele15g0249 874 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 545 786 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele15g0249 874 FunFam ABC transporter B family member 1 524 776 - -
Lele15g0249 874 MobiDBLite consensus disorder prediction 464 498 - -
Lele15g0249 874 PANTHER ABC TRANSPORTER B FAMILY 23 429 - -
Lele15g0249 874 Pfam ABC transporter 391 447 IPR003439 GO:0005524
Lele15g0249 874 Gene3D - 362 429 IPR027417 -
Lele15g0249 874 Gene3D - 823 863 IPR027417 -
Lele15g0249 874 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 61 337 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele15g0249 874 MobiDBLite consensus disorder prediction 15 30 - -
Lele15g0249 874 Pfam ABC transporter transmembrane region 61 323 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele15g0249 874 Pfam ABC transporter transmembrane region 544 789 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele15g0249 874 Gene3D ABC transporter type 1, transmembrane domain 773 822 IPR036640 GO:0005524|GO:0016020
Lele15g0249 874 Gene3D ABC transporter type 1, transmembrane domain 47 361 IPR036640 GO:0005524|GO:0016020
Lele15g0249 874 FunFam ABC transporter B family member 9 47 369 - -
Lele15g0249 874 SUPERFAMILY ABC transporter transmembrane region 532 813 IPR036640 GO:0005524|GO:0016020
Lele15g0249 874 CDD ABC_6TM_Pgp_ABCB1_D1_like 60 333 - -
Lele15g0249 874 SUPERFAMILY ABC transporter transmembrane region 46 356 IPR036640 GO:0005524|GO:0016020
Lele15g0249 874 Gene3D ABC transporter type 1, transmembrane domain 467 772 IPR036640 GO:0005524|GO:0016020
Lele15g0249 874 MobiDBLite consensus disorder prediction 451 498 - -
Lele15g0249 874 MobiDBLite consensus disorder prediction 1 38 - -
Lele15g0249 874 CDD ABC_6TM_Pgp_ABCB1_D2_like 534 816 - -
Lele15g0249 874 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 361 430 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0249 Lele-ChrLele15 1415647 1421791 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0249 413 868 Calmodulin-binding Proteins AT2G36910 32.072 3.16e-68 245