Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0243 ATGACGAAACTTTTCAAAGAAATGATGACATGGATGGATGAATTGCACGTAAAGCTCAAAGAGCACTCTTGCTGCTATAAGCAGAAACTTCGCAAGGGTCTATGGTCCCCTGAGGAGGATGAAAAACTTCTGAGACATATTACTAAGTGTGGCCATGGCTGTTGGAGCTCTGTTCCTAAGCAAGCCGGCCTGCAGAGGTGTGGTAAGAGCTGTAGGCTGAGGTGGATCAATTACCTGAGGCCTGATTTGAAGAGAGGAACATTCTCACAGGAAGAAGAAAACCTTATAATTGAACTTCACGCAGTACTGGGAAATAGATGGTCTCAAATTGCGGCGCAATTGCCCGGAAGAACTGACAATGAAATAAAGAATCTGTGGAATTCTTGCTTAAAGAAGAAACTGAAGCAGAGAGGCATCGACCCTGTTACCCACAAACCACTCTCAGAGATTCAAAATCGAGACGACAGAGACAAGGAGCTCAGTGAATTGAAACTCCTCAAATCAGAAAGCCCCGATTCAGATGCTACAAAAGCCTACACACCCATTATGGAAGGTTGTTCCAGTTTCAAGTACAACAATAACACAAGTAACACCAATCTGCCAACCAACTGTAGCAGCAAAGAATTTCTCCCAGATGGGTTTACAACGAGCTACGCCTCTTCAGGGCTGATTGGGAATTTCCCACTTCAGATGAATTATGCACCCACTGGCGATACCTTCTCTGCTAATTCAAACCCTTCTTCCGAATGGTTCACCCAAACAGGGAGACCAATATTCAATATGAACTCTGAATTTGCTTCCAATTCCACGTCTCCTGTTCTCGTGCCTCCACCACCCACTTCATATCTTGGCGTTCCCTGCGATGATATTTGTGCAGCCTCGTACACTGAGAATGCATCCCAATCTCATTTCTGGGAATTGACAGATTCTGCAAAAGAGGCACAAATTCAGGTGCTGCAAAACCAAACAGAGGAAGCCAAGTGGGGAGATTACGTTCAAAACCCAATCTTGATGCTGCCCGCGACTCATCTGGTGATAGGTGTCCGTGAGCCAGAAAGCACGGAACTGAAGTGA 1074 0.4544 MTKLFKEMMTWMDELHVKLKEHSCCYKQKLRKGLWSPEEDEKLLRHITKCGHGCWSSVPKQAGLQRCGKSCRLRWINYLRPDLKRGTFSQEEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLKQRGIDPVTHKPLSEIQNRDDRDKELSELKLLKSESPDSDATKAYTPIMEGCSSFKYNNNTSNTNLPTNCSSKEFLPDGFTTSYASSGLIGNFPLQMNYAPTGDTFSANSNPSSEWFTQTGRPIFNMNSEFASNSTSPVLVPPPPTSYLGVPCDDICAASYTENASQSHFWELTDSAKEAQIQVLQNQTEEAKWGDYVQNPILMLPATHLVIGVREPESTELK 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0243 357 Pfam Myb-like DNA-binding domain 85 129 IPR001005 -
Lele15g0243 357 Pfam Myb-like DNA-binding domain 32 79 IPR001005 -
Lele15g0243 357 FunFam Myb transcription factor 29 85 - -
Lele15g0243 357 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 80 134 IPR017930 -
Lele15g0243 357 FunFam MYB transcription factor 86 158 - -
Lele15g0243 357 ProSiteProfiles Myb-like domain profile. 80 130 IPR001005 -
Lele15g0243 357 CDD SANT 87 127 IPR001005 -
Lele15g0243 357 SUPERFAMILY Homeodomain-like 30 126 IPR009057 -
Lele15g0243 357 SMART sant 84 132 IPR001005 -
Lele15g0243 357 SMART sant 31 81 IPR001005 -
Lele15g0243 357 Gene3D - 86 162 - -
Lele15g0243 357 Gene3D - 29 85 - -
Lele15g0243 357 ProSiteProfiles Myb-like domain profile. 27 79 IPR001005 -
Lele15g0243 357 PANTHER MYB DOMAIN PROTEIN 55 21 249 - -
Lele15g0243 357 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 27 79 IPR017930 -
Lele15g0243 357 CDD SANT 35 79 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0243 Lele-ChrLele15 1356906 1360659 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0243 19 256 MYB Transcription Factor Family AT4G01680 60.669 2.50e-88 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele15g0243 Myb_DNA-binding 9.3e-14 CL0123