Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0241 ATGATCTTGACTGCATTAGAAATTGTCCGTCAAGGTGCTGATGTTATGCCAAAGAGCCAGCTTAATCAAGTTTTAAATGCTGAGTTAGGTCCTGAATGGATCTCAAAATTGATTAGTCTTGCTTATGAACCAATGGCCGCTGCAAGTATTGGCCAGGCTGTCACAAAGGATGGCATGCATGTTGCAATGAAAATTCAGTACCCTGGTGTTTCGGATAGCATTGAGAGTGACATTGAGAATGTGAAACTTCTTTTAGATTATACAAATCTAATTCCTGGAGGACTTTATCTTGACAGAGCTATGAAGGCAGAGAAGGATTTTTATGTTCCATTAGTTGTGGATGATATTTCAAGGAAAAGAGTTTTAACTACAGAACTTGTTTCTGGAATTACCATTGACAAAGTGGCATCATTGGATCAGGAAACTCGCAATTATGTTGGGAAAAAGCTGTTGGAACTCACTGTTGGAGTCTTGATGGTTTTCTACTCCTTTGTTATGCAGACTGATCCTAATTGGGAAAATTTCTTGCATAATGAAGCCACTAAGTCGATCAATCTCATTGATTTTGGAGCATCACGGGATTACCCAAAAAGATTTGTTGATGATTATTTAAAAATGGTTCTAGCATGTGCTAATCGTGACAGTGATGGAGTCGTTGAGATGTCCAAGAGACTTGGGTTCATCGCTAGAATGGAATCAGAGGTGATGTTAGATGCCCACGTTCAAGCTGGGTTTGTGGTAGGAACGCCATTTGCAAAACTTGGTGGGTACGACTTCCACGCAAACAACATCACTCACAGCCTTTCGCACCTAGGCGGAACAATGCTGAAGCACAGGCTGACGCCACCTCCTGATGAATCCTATAGTCTGCACAGAAAGCTTTCCTGTGCGTTTTTAGCTTGCATCAAGATGGGAGCTGTGGTCCCTTGTCGGGAACTATTATTAGAAGTACACGAGCAGCATCAGTCCGTTGACGGAGGCAGTGAAATTTCTTCAGAGGCAAAGCCACTGGCTACGGTAGCAGACATGGCAATGAAGCTGATTTTGATAGCCATTGGTTTTGCTTTCTTCATTTCTGGGGTTTTCTCCATTGGATCTGAGACACATTCTGCATTTTCTTACTTAGAGAATGATTTCGTCGCAGCAAAAGCTTCCTCCTCGCCCCAACCTCTCATGGTCGCCCTCACTCTCATTCAAGGAGCTGCTTCTAAGGGAGCTGTCTGTTTGGATGGAACACTGCCTGGTTACCACTTGCATCGTGGGTTCGGATCTGGGGCTAATAGTTGGCTCATTCAACTAGAGGGTGGAGGGTGGTGTAATACCATCAGGAGTTGTGTTTTTAGAAAAACTACTCGTCGTGGTTCCTCAAATCACATGGAAAAGCAAATACCATTCACGGGAATTTTGAGCAATAAAGCTGAAGAAAATCCTGATTTCTTCAACTGGAACAGAGTCAAATTACGGTACTGTGATGGAGCTTCGTTCAGTGGGGACAGTGAAGACACGAGTGCACAACTTCAATTCAGAGGACAAAAAATATGGCTGGCTGCTATGGAGGAGTTAATGTCCAAGGGAATGCAGAATGCGAACCAGGCCCTTCTCTCTGGATGCTCTGCGGGTGGCCTGGCATCCATTATACATTGTGACGAATTGCGGGGCTTGTTTCCTAAATCTGCCAAAGTGAAATGTTTGAGTGATGCAGGGCTTTTTCTTGATGCAATTGATGTATCTGGAGGACACACATTGAGGAATCTATATGGAGGTGTTGTTAAATTACAGGAAGTACAAAAAAATCTGCCAGCAAGTTGTCTCAACAAACTGGATCCCACTTCGTGCTTCTTTCCTCAGAATTTGATAAACCATGTTCAGACCCCTTTGTTTTTACTCAATGCGGCCTATGATGCATGGCAGCTCCAATCCAGTTTAGCACCGCCTTCGGCTGACCCCCATGGCTCTTGGAATAACTGCAAATCAAACCACGCGAACTGTAATTCATCTCAAGTTCAGTTCCTCCAAGACTTCAGAAATCAAATGCTTAATGCTTTGAATGGTTTCTCACTGTCATCTCAAACTGGATTATACGTAAATTCTTGTTTTGCTCATTGCCAATCTGAGAGACAGGACACTTGGTTTGCTGATGACTCTCCCTTGATTAAGAACAAGCCAATTGCAATAACTGTTGGAGACTGGTATTTTGATCGACAAGTCGTCAAAGCTATTGACTGTGCATACCCCTGTGACAAGACCTGCCATAATCTGGTCTTCAATGATGGTGTATCTTCCACAGCAGATCCCCAGCCCTCAAGTGCCGATTCTACTGTCATCATGGTATATCCCTCCGACTCTCCGAGGTTGACCTTAACCCCCCTATACATGCTGACTGCCTACTTCCTTGTCGATTTCATGTTCCTTTTGCAAAATGGAGACCCTCTTTTTGTCCTTGCTCGATCTTCCATTCAAGCTGTTCTATCGAACAAGCTGTAA 2484 0.4364 MILTALEIVRQGADVMPKSQLNQVLNAELGPEWISKLISLAYEPMAAASIGQAVTKDGMHVAMKIQYPGVSDSIESDIENVKLLLDYTNLIPGGLYLDRAMKAEKDFYVPLVVDDISRKRVLTTELVSGITIDKVASLDQETRNYVGKKLLELTVGVLMVFYSFVMQTDPNWENFLHNEATKSINLIDFGASRDYPKRFVDDYLKMVLACANRDSDGVVEMSKRLGFIARMESEVMLDAHVQAGFVVGTPFAKLGGYDFHANNITHSLSHLGGTMLKHRLTPPPDESYSLHRKLSCAFLACIKMGAVVPCRELLLEVHEQHQSVDGGSEISSEAKPLATVADMAMKLILIAIGFAFFISGVFSIGSETHSAFSYLENDFVAAKASSSPQPLMVALTLIQGAASKGAVCLDGTLPGYHLHRGFGSGANSWLIQLEGGGWCNTIRSCVFRKTTRRGSSNHMEKQIPFTGILSNKAEENPDFFNWNRVKLRYCDGASFSGDSEDTSAQLQFRGQKIWLAAMEELMSKGMQNANQALLSGCSAGGLASIIHCDELRGLFPKSAKVKCLSDAGLFLDAIDVSGGHTLRNLYGGVVKLQEVQKNLPASCLNKLDPTSCFFPQNLINHVQTPLFLLNAAYDAWQLQSSLAPPSADPHGSWNNCKSNHANCNSSQVQFLQDFRNQMLNALNGFSLSSQTGLYVNSCFAHCQSERQDTWFADDSPLIKNKPIAITVGDWYFDRQVVKAIDCAYPCDKTCHNLVFNDGVSSTADPQPSSADSTVIMVYPSDSPRLTLTPLYMLTAYFLVDFMFLLQNGDPLFVLARSSIQAVLSNKL 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0241 827 Pfam Pectinacetylesterase 387 736 IPR004963 GO:0016787
Lele15g0241 827 PANTHER NOTUM-RELATED 372 752 IPR004963 GO:0016787
Lele15g0241 827 SUPERFAMILY Protein kinase-like (PK-like) 35 215 IPR011009 -
Lele15g0241 827 Pfam ABC1 atypical kinase-like domain 10 96 IPR004147 -
Lele15g0241 827 Pfam ABC1 atypical kinase-like domain 99 222 IPR004147 -
Lele15g0241 827 CDD ABC1_ADCK3 5 226 IPR034646 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0241 Lele-ChrLele15 1339803 1350628 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0241 356 755 Carbohydrate Esterase AT2G46930 68.905 0.0 608
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0104 06 636936 637712 Lele15g0241 15 1339803 1350628 CCT
Lele07g0303 07 1663604 1664402 Lele15g0241 15 1339803 1350628 CCT
Lele08g0105 08 621733 622509 Lele15g0241 15 1339803 1350628 CCT
Lele05g0285 05 1601042 1603837 Lele15g0241 15 1339803 1350628 CCT
Lele13g2170 13 28335414 28338924 Lele15g0241 15 1339803 1350628 hybridization
Lele14g2108 14 26671919 26676620 Lele15g0241 15 1339803 1350628 hybridization