Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele15g0233 | ATGTCTTCTTTAATAGGCGTTTCGTCTATATACCAGACTCCGTCTCTGGAACTATATAAAAGAGCGACAACAACTATAGGTGCTACCACCTCCCTTTCCTTCCAATTTTCTGACAACAAGTCCCACTTTAACAACGTTCTGAGAGCTCACCTCAGTAACAGTGGCAGCGGAAATTTTAAGAGTGTGACTAAACCTAGAGCTAACTTTGTTCCTTCTTCAATTACCACGCCCAACTCTTCCGTTCTGAGTGAAGAAGCGTTCAAGGGCATAGTTGGGGGTTTCTCCGACAAAGACCCTTTGGATGATGTTATTGAAAACGATGACTATGGCTATGACTCTGAAACTGAGGTTTCGTCTGCTGTTGAAAACGAGGAGGAGCTCGACATTTCCAAGCTGGACTTGCCTTCGCGCGTTGTGGAATCACTACAGCAACGTGGGATTACTCATCTTTTCCCCATTCAGAGAGCTGTTTTAGTGCCGTCCCTTCAAGGTCGAGATCTTATTGCCCGAGCAAAGACTGGGACTGGAAAGACATTGGCATTTGGGATTCCAATTATTAAAGGGCTCACTGACGATGAACAAAGTACCTCCCAGAGACGATCTGGTCGTCTTCCCAAAGTATTGGTCCTTGCACCTACCAGGGAGTTAGCAAAGCAAGTGGAGAAAGAGATAAAAGAATCTGCACCCTATTTGAGCACAGTCTGTGTTTATGGGGGCGTTTCTTATGTTACACAACAAAATGCACTTTCTCGTGGTGTTGATGTAGTGGTTGGAACACCTGGTAGAATAATTGACCTAATAAACGGGAACAGTCTTAAACTGAGTGAAGTGCAGTATTTGGTCCTTGATGAGGCTGATCAGATGCTTGCTGTTGGGTTTGAGGAGGACGTAGAAGTAATTTTGGAGAAACTGCCATCAGAACGGCAGAGCATGCTTTTTTCTGCAACCATGCCTGCCTGGGTGAAGAAACTTGCCAGAAAATATTTGAACAATCCATTGACAATTGATTTGGTTGGTGAAGAAGAGGAAAAACTTGCGGAAGGGATCAAACTTTATGCAATATCAGCCACCGCCACTTCTAAGCGGACAATGCTTTCTGATCTGATAACTGTTTATGCAAAGGGGGGAAAGACTATTGTTTTTACCCAGACAAAACGAGATGCTGATGAAGTATCGTTGTCATTAACAAATAGCATACCTTCTGAGGCACTGCATGGCGATATATCTCAGCATCAGAGAGAGAGAACATTGAATGGTTTTCGGCAAGGGAAATTCACAGTTCTTGTTGCCACTGATGTAGCAGCACGTGGACTTGATATTCCTAATGTTGATCTGGTTATTCACTATGAACTACCCAATGACCCTGAGACATTTGTACATCGCTCTGGTCGTACTGGGCGTGCTGGAAAGCAAGGTACTGCCCTTTTGATGTACACCAGTAGCCAGAGGAGAACAGTTAGATCTCTTGAGCGTGATGCAGGCTGTAAATTCGAATTTATTACTCCGCCAGCTATAGATGATGTTTTGGGATCCTCAGCTGACCAAGTGGTTGCCACACTTAATAGAGTTCATCCTGAATCCGTTGAGTTTTTCACTCCAACTGCACAAAAATTGATTGAGGAGCTAGGAACAAGTGCCCTTGCAGCTGCACTAGCACAACTAAGTGGATTTGCAAAACCTCCCTCATCCCGTTCTCTTATCAACCATGAGCAGGGATGGGTTACATTACGACTAACTCGAGATCAAGGAGATTCTAGAAGGTTTTTGTCTGCAAGATCGGTCACTGGGTTTCTTTCCGATGTTTATTCTCCAGCTGCTGATGAAGTTGGAAAAATACATATAATTGCAGACGAAAGGGTTCAAGGGGCCGTTTTTGATCTTCCCGAGGAGATTGCTAAAGAGTTACTGAACAAGGAAATACCACCTGGCAACACAATTTCTAAGATTACCAAGTTGCCTCCTTTGCAAGATGATGGGCCTCCAAGTGATTTCTATGGGAAGTTTTCTGATAGAGATCGTAGAGGTTCTAGGGATCGGAGAGGTTTTAAAACCTCTCGGAGTCGGGATGGGGGCCGTGATTTTGATGATGAATTTGGTGATTCATATAGAAGAGGTGGTCGAAGTTTTGGAACTGGCAATAGCTGGTCTCAAAGGGCAAGAAACAGTGGAAGCTTTGATGATTTTGGTGATTCAAACAGGAAAGGTGGTCGAAGTAATAGAACTGGCAATAGCTGGTCTCAAAAGGCAAGAAGCAACGGTGATGATTGGCTAATTGGAGGTAGAAGATCAAGCAGGTCTTCATCGTCAGACAGAGGCGGCTTTGGAGGGGCTTGCTTTAATTGTGGGCAATCTGGACATCGTGCATCCGAATGTCCCAACAAACTTGGCTTTTAA | 2394 | 0.4428 | MSSLIGVSSIYQTPSLELYKRATTTIGATTSLSFQFSDNKSHFNNVLRAHLSNSGSGNFKSVTKPRANFVPSSITTPNSSVLSEEAFKGIVGGFSDKDPLDDVIENDDYGYDSETEVSSAVENEEELDISKLDLPSRVVESLQQRGITHLFPIQRAVLVPSLQGRDLIARAKTGTGKTLAFGIPIIKGLTDDEQSTSQRRSGRLPKVLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYVTQQNALSRGVDVVVGTPGRIIDLINGNSLKLSEVQYLVLDEADQMLAVGFEEDVEVILEKLPSERQSMLFSATMPAWVKKLARKYLNNPLTIDLVGEEEEKLAEGIKLYAISATATSKRTMLSDLITVYAKGGKTIVFTQTKRDADEVSLSLTNSIPSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKQGTALLMYTSSQRRTVRSLERDAGCKFEFITPPAIDDVLGSSADQVVATLNRVHPESVEFFTPTAQKLIEELGTSALAAALAQLSGFAKPPSSRSLINHEQGWVTLRLTRDQGDSRRFLSARSVTGFLSDVYSPAADEVGKIHIIADERVQGAVFDLPEEIAKELLNKEIPPGNTISKITKLPPLQDDGPPSDFYGKFSDRDRRGSRDRRGFKTSRSRDGGRDFDDEFGDSYRRGGRSFGTGNSWSQRARNSGSFDDFGDSNRKGGRSNRTGNSWSQKARSNGDDWLIGGRRSSRSSSSDRGGFGGACFNCGQSGHRASECPNKLGF | 797 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele15g0233 | 797 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 158 | 335 | IPR014001 | - | |
Lele15g0233 | 797 | Pfam | Zinc knuckle | 777 | 793 | IPR001878 | GO:0003676|GO:0008270 | |
Lele15g0233 | 797 | MobiDBLite | consensus disorder prediction | 735 | 751 | - | - | |
Lele15g0233 | 797 | CDD | GUCT_Hera | 563 | 643 | - | - | |
Lele15g0233 | 797 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 206 | 490 | IPR027417 | - | |
Lele15g0233 | 797 | PANTHER | ATP-DEPENDENT RNA HELICASE RHLE-RELATED | 119 | 685 | - | - | |
Lele15g0233 | 797 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 364 | 509 | IPR001650 | - | |
Lele15g0233 | 797 | CDD | DEADc | 138 | 336 | - | - | |
Lele15g0233 | 797 | SUPERFAMILY | Retrovirus zinc finger-like domains | 758 | 795 | IPR036875 | GO:0003676|GO:0008270 | |
Lele15g0233 | 797 | MobiDBLite | consensus disorder prediction | 707 | 728 | - | - | |
Lele15g0233 | 797 | MobiDBLite | consensus disorder prediction | 642 | 773 | - | - | |
Lele15g0233 | 797 | FunFam | ATP-dependent RNA helicase RhlE | 119 | 338 | - | - | |
Lele15g0233 | 797 | Pfam | Helicase conserved C-terminal domain | 362 | 469 | IPR001650 | - | |
Lele15g0233 | 797 | SMART | c2hcfinal6 | 777 | 793 | IPR001878 | GO:0003676|GO:0008270 | |
Lele15g0233 | 797 | CDD | SF2_C_DEAD | 349 | 478 | - | - | |
Lele15g0233 | 797 | Gene3D | - | 763 | 796 | - | - | |
Lele15g0233 | 797 | SMART | ultradead3 | 146 | 352 | IPR014001 | - | |
Lele15g0233 | 797 | ProSiteProfiles | Zinc finger CCHC-type profile. | 778 | 793 | IPR001878 | GO:0003676|GO:0008270 | |
Lele15g0233 | 797 | Pfam | DEAD/DEAH box helicase | 151 | 324 | IPR011545 | GO:0003676|GO:0005524 | |
Lele15g0233 | 797 | Gene3D | - | 128 | 339 | IPR027417 | - | |
Lele15g0233 | 797 | MobiDBLite | consensus disorder prediction | 664 | 703 | - | - | |
Lele15g0233 | 797 | Pfam | GUCT (NUC152) domain | 556 | 656 | IPR012562 | GO:0003723|GO:0004386|GO:0005524 | |
Lele15g0233 | 797 | Gene3D | - | 351 | 546 | IPR027417 | - | |
Lele15g0233 | 797 | FunFam | Nucleolar RNA helicase II | 357 | 547 | - | - | |
Lele15g0233 | 797 | SMART | helicmild6 | 389 | 469 | IPR001650 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele15g0233 | Lele-ChrLele15 | 1309845 | 1314930 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele15g0233 | 141 | 491 | Eukaryotic Initiation Factors Gene Family | AT1G72730 | 38.611 | 2.75e-64 | 219 |