Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0230 ATGTCTTCCTCAAGGCGCAGCCAATCGTCCAGCAATTCAGGAAGATCGAGACTCAGTGCTAGGATTATTGCTCAGACCACCGTGGATGCAAAACTTCATGCGGATTTTGAGTCTGGTAGCTCCTTTGACTATTCCAGCTCAGTGCGTGTTTCGGGTACCTTTAGGGGTGGAGAGCATCAGTCAAGTTCTGGCAGAGTTACAACAGCTTACCTCCATCACGTACAGAAGGGCCTATTGATCCAGCCTTTTGGCTGCTTGCTAGCCTTAGATGACAAAACATGCAAGGTCATTGCTTACAGTGAGAATGCCCCTGAAATGCTTACTATGGTTAGTCAAGCTGTGACAAATGTCGGTGACCAACCTGCTATTGCAATGGAAACCGACATTAGAAGCATTTTCACTGGCCAAAGTGCTTCTGCCTTGTAG 426 0.4742 MSSSRRSQSSSNSGRSRLSARIIAQTTVDAKLHADFESGSSFDYSSSVRVSGTFRGGEHQSSSGRVTTAYLHHVQKGLLIQPFGCLLALDDKTCKVIAYSENAPEMLTMVSQAVTNVGDQPAIAMETDIRSIFTGQSASAL 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0230 141 Gene3D PAS domain 77 141 - -
Lele15g0230 141 SUPERFAMILY PYP-like sensor domain (PAS domain) 79 136 IPR035965 -
Lele15g0230 141 Pfam PAS fold 69 141 IPR013654 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0230 Lele-ChrLele15 1295200 1295625 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0230 1 141 Histidine Kinase Gene Family AT1G09570 70.629 1.64e-56 187