Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele15g0226 | ATGGGGGTAAAGGGTTTAACAAAGCTGTTAACGGATAATGCCCCCAAAGCTGTAAAGGAGCGTAGCTTCCAAAGCTATTTCGGCCGCAAGATTGCCATTGACGCTAGCATGAGCATGTACCAGTTCCTTGTCCGTAGTCTCCAGCCTTCACTCTGCTTCCCTCTTATCACGTTTACTTATGTGGTTGTCGTGGGAAGAAGTGGGACTGAGATGCTCACCAATGAGGCTGGTGAAGTAACTAGTCATTTGCAAGGCATGTTTACCCGGACAGTCAGACTTCTAGAAGCCGGAATGGAGCCAGTATATGTTTTTGATGGGAAGCCACCTGATCTGAAGAAGCAGGAGCTGGCTAAACGTTACACAAAGAGGGCTGAAGCTCATGAGGATTTGTCAGAGGCCCTTGAGTCTGGCAACAAGGAAGACATTGAAAAATTCAGTAAACGGACAGTCAAGGTGACAAAGCAGCATAGCGACGGTTGTAAAAGACTTTTATCACTCATGGGAGTGCCTGTTATTGAGGCGACATCAGAAGCTGAAGCACAGTGTGCTGCCCTTTGCAAATCTGGAAAGGTTTATGCAGTGGCTTCTGAAGACATGGATTCATTAACATTTGGAGCTCCTAGATTTCTTCGCCATCTAATGGTTCCTAGCTCAAAGAAAGTTCCAGTTATGGAATTCGAAGTTGCCAAGATATTGGAGGAGCTAAATCTGACCATGGATCAGTTTATAGACTTATGTATTCTTTCTGGATGTGATTATTGTGGAAGCATTCGAGGTATTGGTGGTAAGACTGCTTTGAAGCTCATTCACCAGCATAGCTGTATAGAGAACTTATTGAAGAACATAAATAAAGAGAGGTACCAGATACCAGATGATTGGCCATATCAGGAGGTTAGGCAGCTTTTTAAGGAACCGGCAGTCTTAGCTGAAGAAAAGCAACTAGACCTTAAGTGGACTGCTCCTGATGAAGAAGGTTTAATGACATTTCTGGTAAATGAGAATGGATTCAACAGAGATAGGGTGACAAAGGCGATAGAAAAAATTAAGGCAGCAAAGAACAAGTCTTCACAGGGCCAATCAGAATCTGATTTTAAGCCAATGGCGAACTACTCTGCACCCATTAAAGGCAAGGGGAGCAAATGCATGCTTAGATCCTTTAAACCTACAACTAAGTGTAAGATGTTATCCCCACAACTTTATAACTGGTCAAGGCCCATGGTTATCGGCAACCTGAGCATTGCCTGCGCGGGTTTCAAGCTATCTGTCATGACATAG | 1275 | 0.44 | MGVKGLTKLLTDNAPKAVKERSFQSYFGRKIAIDASMSMYQFLVRSLQPSLCFPLITFTYVVVVGRSGTEMLTNEAGEVTSHLQGMFTRTVRLLEAGMEPVYVFDGKPPDLKKQELAKRYTKRAEAHEDLSEALESGNKEDIEKFSKRTVKVTKQHSDGCKRLLSLMGVPVIEATSEAEAQCAALCKSGKVYAVASEDMDSLTFGAPRFLRHLMVPSSKKVPVMEFEVAKILEELNLTMDQFIDLCILSGCDYCGSIRGIGGKTALKLIHQHSCIENLLKNINKERYQIPDDWPYQEVRQLFKEPAVLAEEKQLDLKWTAPDEEGLMTFLVNENGFNRDRVTKAIEKIKAAKNKSSQGQSESDFKPMANYSAPIKGKGSKCMLRSFKPTTKCKMLSPQLYNWSRPMVIGNLSIACAGFKLSVMT | 424 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele15g0226 | 424 | CDD | H3TH_FEN1-Euk | 240 | 308 | - | - | |
Lele15g0226 | 424 | SUPERFAMILY | 5' to 3' exonuclease, C-terminal subdomain | 237 | 370 | IPR036279 | - | |
Lele15g0226 | 424 | Hamap | Flap endonuclease 1 [fen]. | 1 | 365 | IPR023426 | GO:0016788 | |
Lele15g0226 | 424 | PRINTS | Xeroderma pigmentosum group G/yeast RAD superfamily signature | 164 | 181 | IPR006084 | - | |
Lele15g0226 | 424 | PRINTS | Xeroderma pigmentosum group G/yeast RAD superfamily signature | 242 | 257 | IPR006084 | - | |
Lele15g0226 | 424 | PRINTS | Xeroderma pigmentosum group G/yeast RAD superfamily signature | 100 | 119 | IPR006084 | - | |
Lele15g0226 | 424 | PRINTS | Xeroderma pigmentosum group G/yeast RAD superfamily signature | 28 | 42 | IPR006084 | - | |
Lele15g0226 | 424 | PRINTS | Xeroderma pigmentosum group G/yeast RAD superfamily signature | 185 | 205 | IPR006084 | - | |
Lele15g0226 | 424 | CDD | PIN_FEN1 | 4 | 350 | - | - | |
Lele15g0226 | 424 | Pfam | XPG I-region | 168 | 252 | IPR006086 | GO:0004518 | |
Lele15g0226 | 424 | SMART | xpgineu | 165 | 237 | IPR006086 | GO:0004518 | |
Lele15g0226 | 424 | SMART | xpgn3 | 1 | 126 | IPR006085 | GO:0004518 | |
Lele15g0226 | 424 | SMART | HhH_4 | 239 | 272 | IPR008918 | GO:0003677|GO:0003824 | |
Lele15g0226 | 424 | FunFam | Flap endonuclease 1 | 237 | 304 | - | - | |
Lele15g0226 | 424 | FunFam | Flap endonuclease 1 | 1 | 239 | - | - | |
Lele15g0226 | 424 | Gene3D | - | 2 | 236 | - | - | |
Lele15g0226 | 424 | PANTHER | FLAP ENDONUCLEASE FAMILY MEMBER | 1 | 367 | IPR006084 | - | |
Lele15g0226 | 424 | Pfam | XPG N-terminal domain | 1 | 45 | IPR006085 | GO:0004518 | |
Lele15g0226 | 424 | Pfam | XPG N-terminal domain | 74 | 126 | IPR006085 | GO:0004518 | |
Lele15g0226 | 424 | Gene3D | - | 237 | 304 | - | - | |
Lele15g0226 | 424 | SUPERFAMILY | PIN domain-like | 2 | 252 | IPR029060 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele15g0226 | Lele-ChrLele15 | 1283890 | 1288197 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele15g0226 | 1 | 402 | Core DNA Replication Machinery Family | AT5G26680 | 74.129 | 0.0 | 631 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele13g2186 | 13 | 28388422 | 28393400 | Lele15g0226 | 15 | 1283890 | 1288197 | hybridization | |
Lele14g2123 | 14 | 26759769 | 26763858 | Lele15g0226 | 15 | 1283890 | 1288197 | hybridization |