Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0200 ATGGCATCTTTGGAATCAATTGTAGAACCTATTAGTTCAGAGACGTGCCCGGAAGGCAATCAGAGAAAGCGTAGGAAAATCGGGCATGATGTCCGCAACGATCAGAATTCGCTCGCTCCGATTCCGTGGAGATCTGAGACAGAGCAGCGGATCTATTCCTCCAAGCTCGTCGAAGCTCTCCGCCGCGTTCTTCGCCATAATCCTACTTCCACGGCCAAACCTCGCCTCGGACGTGACGCTCGTGAGATAGCCGACAGAGTTCTAGCGGTGACGGCGAAAGGCAGGACTCGGTGGAGTCGGGCGATACTGGCCTCTCCGCTCAGCCGGAGAAAGTTCCAGAGGCAGCATAGGAAGGTCAAGAAGGCGGCGAACGTATTGAAGAAACCAGAGGTTAGAATAGAGAGAAGAAGGCTGCCGGCCGTGCAGAGGAAAGCGCGAGTCCTCAGCCGGTTAGTTCCCGGTTGCCGGAAGGTCTCGTTTACGAGTCTTCTGGAAGAAACCACCGATTATATTTCGGCCTTGGAAATGCAAGTGCGGTCCATGACAGCACTCACCGAGCTACTCGGAGGTGGAGCGGCGGCCGACCGGGCCGGGCGTCCTCCACCGTGA 609 0.5649 MASLESIVEPISSETCPEGNQRKRRKIGHDVRNDQNSLAPIPWRSETEQRIYSSKLVEALRRVLRHNPTSTAKPRLGRDAREIADRVLAVTAKGRTRWSRAILASPLSRRKFQRQHRKVKKAANVLKKPEVRIERRRLPAVQRKARVLSRLVPGCRKVSFTSLLEETTDYISALEMQVRSMTALTELLGGGAAADRAGRPPP 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0200 202 CDD bHLH_AtIBH1_like 132 185 IPR044549 GO:0006355
Lele15g0200 202 MobiDBLite consensus disorder prediction 1 17 - -
Lele15g0200 202 MobiDBLite consensus disorder prediction 18 32 - -
Lele15g0200 202 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 131 190 IPR036638 GO:0046983
Lele15g0200 202 MobiDBLite consensus disorder prediction 1 37 - -
Lele15g0200 202 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 125 174 IPR011598 GO:0046983
Lele15g0200 202 Gene3D - 116 190 IPR036638 GO:0046983
Lele15g0200 202 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 44 188 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0200 Lele-ChrLele15 1173717 1174325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0200 43 184 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 51.235 1.82e-38 130
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0227 05 1270686 1271294 Lele15g0200 15 1173717 1174325 CCT
Lele15g0200 15 1173717 1174325 Lele15g0200 15 1173717 1174325 ECH
Lele13g2211 13 28502072 28502680 Lele15g0200 15 1173717 1174325 hybridization
Lele14g2149 14 26889353 26891456 Lele15g0200 15 1173717 1174325 hybridization