Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0195 ATGGTTATTGCTACGGCCGCCCTCTCTAGCTATTCTTTCAAATTTTCGGTTCGCCAAGCTTCTCTATCGTCGCCGTCTTCCGCTCGAATTCGCCATCGCTTCCCTTCTAGCCGATGGTTGAACTTTAATCATCTTTGTGCCTCTCATAGGTTTGACTGTTTAAGTTCAAGATGTTCAATAACAAATACCGATATACAATTGCATCATGTCACAACCGATGAGGCTCAAGGAGAGTCATCAACTGTTGAACCTAATTGTCCGGTGCCAATAGTTAAACTCAGCTCTGATATTATTGAGACTGAGTCCCTGAATCTACTGACTGAAGGCACATATGTAGATAGTCTCTTGACAGCATTACCTGTTTTGTCGGAAAAGGAGCAACATGTCCTTGCAGCTACACCAGCTCACCCAGCTGCATTATACGCTTTCTATGCAAACTGCATAGCTGGAAATTTAGTTGAACAGATTTGGAATTTTGCTTGGCCTTCTGCCATTGCCTTGATTCATCCAAGCCTTTTACCTGTTGCGGTAATGGGTTTTTTCACCAAAGTTGCTATAATTGTTGGAGGCCCCCTGGTTGGGAAATTTATGGACCATTTTCCCAGAGTATCTGCATATAATTGCTTGAATATCATTCAGGCTTCTGCGCAGTTGCTGTCTGCGAGAATGATCATTCTTGCCCATTCTGCTTGTCCAACCTCTGTGACTTCCATGCTTCTATGCCCATGGTTTCTTGTATTAGTTTCAGCTGGGGCTATTGAAAGGCTATGCGGTGTTGCAGTGGGGGTTGCAAATGAACGTGACTGGGTTGTATTGCTGGCAGGAGTTAATAGGCCAATTGCACTTGCACAAGCAAATGCAGTACTAAATCGGATTGATCTAATTTGTGAGATAGTTGGGGCATCACTTTTTGGAGCTCTCCTTTCTCAGTTTCATCCAGTAACCTGCTTGAAATTTGCTGCTGGCTTGATGATGGGATTACTTCCTGTTACAATTGCACTCACATGGCTAGCCAACAAGCTCTCCACCGGTGTTCTTGACCGGTCTAAATCTTCACAAACTTGTTGCAGAGTATTCACTGAAGATTCTGGGCCACATGCTTACAATATAGTTGTTAAAGGTGTAGAAGCCATAAAGCTTGGCTGGAAGGAATATCTGGGCCAGCCAGTTCTTCCCGCAAGTCTTGCGTGGGTGCTCCTATACTTCAATGTTGTTCTTGGACCTGGAAGTTTGATGACAGCATTTTTAACACAGCGTGGATTACGTCCCTCTATCATTGGAGGATTCAGCGGATTGTGTGCTTTTATGGGTGTTGCTGCGACATTTGTGTCTTCAACTCTGGTCAAACAATTTGGCATTTTAAAGGCGGGGGCAGTCGGATTGGTGTTTCAAGCTTTGCTTCTCAGCATGGCTGTAGCTGTATATTGGAGTGGATCGATTTCCCAACAAAGCCCACTTCTTTTATTCTTGTCCCTGATTATATTGTCACGGTTAGGACACATGTCATATGATGTTGTCGGTGCTCAGATTATTCAGACAGGGATCCCATCATCCAAAGCAAATCTCATAGGGACGACAGAGGTTGCTGTTGCTAGTTTGGCAGAGTCTATAATGCTGGGGGTTGCCATAATTGCAAATGACCCTTCTCATTTTGGGTTTTTGGCAATGCTGTCTCTTCTATCTGTGATTGGTGCAGCATGGATGTTTTGCAGGTGGTTGTTTAATCCAACAGATGAACAGAAAATTCTTTTTTCTTATGATCCTCAATTTTGA 1773 0.4371 MVIATAALSSYSFKFSVRQASLSSPSSARIRHRFPSSRWLNFNHLCASHRFDCLSSRCSITNTDIQLHHVTTDEAQGESSTVEPNCPVPIVKLSSDIIETESLNLLTEGTYVDSLLTALPVLSEKEQHVLAATPAHPAALYAFYANCIAGNLVEQIWNFAWPSAIALIHPSLLPVAVMGFFTKVAIIVGGPLVGKFMDHFPRVSAYNCLNIIQASAQLLSARMIILAHSACPTSVTSMLLCPWFLVLVSAGAIERLCGVAVGVANERDWVVLLAGVNRPIALAQANAVLNRIDLICEIVGASLFGALLSQFHPVTCLKFAAGLMMGLLPVTIALTWLANKLSTGVLDRSKSSQTCCRVFTEDSGPHAYNIVVKGVEAIKLGWKEYLGQPVLPASLAWVLLYFNVVLGPGSLMTAFLTQRGLRPSIIGGFSGLCAFMGVAATFVSSTLVKQFGILKAGAVGLVFQALLLSMAVAVYWSGSISQQSPLLLFLSLIILSRLGHMSYDVVGAQIIQTGIPSSKANLIGTTEVAVASLAESIMLGVAIIANDPSHFGFLAMLSLLSVIGAAWMFCRWLFNPTDEQKILFSYDPQF 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0195 590 SUPERFAMILY MFS general substrate transporter 151 580 IPR036259 -
Lele15g0195 590 Pfam Ferroportin1 (FPN1) 139 562 IPR009716 GO:0005381|GO:0016020|GO:0034755
Lele15g0195 590 PANTHER SOLUTE CARRIER FAMILY 40 MEMBER 130 584 IPR009716 GO:0005381|GO:0016020|GO:0034755
Lele15g0195 590 CDD MFS_SLC40A1_like 142 572 IPR009716 GO:0005381|GO:0016020|GO:0034755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0195 Lele-ChrLele15 1152153 1156574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0195 159 562 Organic Solute Cotransporters AT5G03570 23.853 1.21e-15 77.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele15g0195 15 1152153 1156574 Lele06g0041 06 301712 302434 CCT
Lele15g0195 15 1152153 1156574 Lele08g0040 08 272628 279519 CCT
Lele13g2217 13 28514554 28518843 Lele15g0195 15 1152153 1156574 hybridization
Lele14g2152 14 26899718 26908835 Lele15g0195 15 1152153 1156574 hybridization