Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0191 ATGGATCATAATTACAGGTTCGACGAACATGGCCTCCGCCTCCAAGCGCCCTCCGGATCAGATTGCTTCTTCAAGACCCAGATCGCCAATCACCCTCTTTATCCTAACTTGCTCTCTGCCTACTTAGACTGCCAAAAGGTTGGGGCCACCCCAGAAAGATTATCCCTTCTCGAAGAAATAGGGCTGCAACACCACCTCGTCAACGCTCCTCGTGAGATAGGCGACGACCCTGAACTTGACCACTTCATGGAATTATACTGTGGAGTTCTACATAGATACAAAGAGGAGCTGTCCAGGCCCTTCGACGAAGCCTCCTTGTTTCTCTGCACTATGGAATCAAAACTCCGCAATCTTTGCAACGGAATGTTCACAACTTCATCGGCTCCTCTCTCTGATGAGCCAGGTGGGAGTAAAGAGAAGGGAATAAGTTGTGGAGATGCAAAAGTAGATGAAGGTGATGAATGTGATGGGAGGCGTTTTGGAGGAGATAAAGAGCTAAGAGAAATGCTGCTCCGCAAGTACAGTGGCTACCTAAGCAGTTTGAGGAAGGAGGTGTTGAAGAAAAAGAAAAAGAATAAGCTTCCAAAGGATGCGAGGATGGCTCTCCTTCAATGGTGGAACTCCCACTACAGATGGCCTTATCCTACGGAAGAGGAGAAATTGAAGCTATCAGAAATGACTGGGCTTGATCAAAAGAAGATAAACAATTGGTTCATCAATCAGAGGAAACGCCATTGGAAACCATCCGAAGATATGCGCATCTCCGTCGTGGAAGGTGTCACTGGTGGAGGCAGAGGTTGA 801 0.4757 MDHNYRFDEHGLRLQAPSGSDCFFKTQIANHPLYPNLLSAYLDCQKVGATPERLSLLEEIGLQHHLVNAPREIGDDPELDHFMELYCGVLHRYKEELSRPFDEASLFLCTMESKLRNLCNGMFTTSSAPLSDEPGGSKEKGISCGDAKVDEGDECDGRRFGGDKELREMLLRKYSGYLSSLRKEVLKKKKKNKLPKDARMALLQWWNSHYRWPYPTEEEKLKLSEMTGLDQKKINNWFINQRKRHWKPSEDMRISVVEGVTGGGRG 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0191 266 ProSiteProfiles 'Homeobox' domain profile. 185 248 IPR001356 GO:0003677
Lele15g0191 266 Pfam Homeobox KN domain 205 244 IPR008422 GO:0003677|GO:0006355
Lele15g0191 266 ProSiteProfiles ELK domain profile. 165 185 IPR005539 GO:0003677
Lele15g0191 266 CDD homeodomain 197 249 IPR001356 GO:0003677
Lele15g0191 266 Pfam KNOX1 domain 25 63 IPR005540 GO:0003677|GO:0005634
Lele15g0191 266 Gene3D - 183 256 - -
Lele15g0191 266 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 29 253 - -
Lele15g0191 266 SMART KNOX1_2 22 66 IPR005540 GO:0003677|GO:0005634
Lele15g0191 266 Pfam KNOX2 domain 73 119 IPR005541 GO:0003677|GO:0005634
Lele15g0191 266 SUPERFAMILY Homeodomain-like 187 256 IPR009057 -
Lele15g0191 266 SMART HOX_1 187 252 IPR001356 GO:0003677
Lele15g0191 266 SMART KNOX2_2 69 120 IPR005541 GO:0003677|GO:0005634
Lele15g0191 266 Pfam ELK domain 165 184 IPR005539 GO:0003677
Lele15g0191 266 ProSitePatterns 'Homeobox' domain signature. 223 246 IPR017970 GO:0000981|GO:0006355
Lele15g0191 266 SMART ELK_2 78 98 IPR005539 GO:0003677
Lele15g0191 266 SMART ELK_2 165 186 IPR005539 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0191 Lele-ChrLele15 1124324 1127800 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0191 24 263 Homeobox Transcription Factor Family AT1G23380 51.626 2.06e-76 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-KNOX Lele15g0191 KNOX2 1.7e-21 No_clan