Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele15g0178 | ATGTCGTATCGCCCTACCGGTAACTCCAGGACCGAGGTCCGTCGTAATCGATACAAGGTGGCCGTAGATGCCGAGGAAGGTCGTAGACGGCGAGAGGACACCATGGTCGAGATCCGAAAGAACCGTAGAGAAGAGAGTTTGCAGAAGAAGAGGCGCGAGGGCCTTCAAGCTCAGCAGATGCCTGCTTCAATACACTCTACTGCCGTAGAGAAGAAGTTGGAACACCTGCCATCCATGGTTGCCGGCGTTTGGACAGATGATCACAACCTGCAGCTCGAGTCTACAACTCAGTTTCGAAAGTTGCTTTCAATTGAGCGTAGCCCACCAATTGAGGAGGTTATTCAAACTGGTGTAGTTCCTCGCTTTGTTGAATTTTTGATGAGAGAAGATTTTCCCCAGTTGCAGTTTGAGGCAGCTTGGGCTTTGACGAATATAGCCTCTGGAACATCTGAGAACACTAAAGTGGTGATCGATCATGGTGCTGTGCCAATTTTTGTCAAACTCCTTGGTTCTCCAAGTGACGATGTCCGCGAACAGGCCGTATGGGCATTAGGAAATGTTGCTGGGGATTCTCCCAGGTGCCGCGATCTTGTTCTCAGTCATGGGGCCTTGGTTCCTCTGCTGACACAGTTGAATGAGCAAGCTAAGCTTTCTATGCTTAGAAATGCTACATGGACGCTTTCAAATTTCTGCAGGGGCAAGCCACAACCTCCTTTTGAACAGGTAAAACCTGCACTCCCTGCTCTTGCCCGTCTTATCCACTCAAATGATGAAGAAGTCTTGACTGATGCTTGCTGGGCACTTTCATATCTTTCTGATGGTACAAATGACAAAATTCAAGCTGTAATTGAATCTGGTGTATGTGCTCGGCTTGTTGAGCTTTTGTTGCATCCATCCCCTTCTGTGCTTATTCCTGCTCTTCGTACAGTTGGAAATATTGTCACTGGAGACGATATGCAGACTCAGGTTATAATCAACCATCAGGCACTTCCTTGTCTTTTGAATCTATTAACAAACAACTATAAAAAAAGCATAAAGAAGGAAGCCTGTTGGACCATATCAAATATTACAGCTGGGAATAAACTACAGATTCAGGCTGTAATTGAGGCTAATTTAATTGATCCTCTCGTTCACCTTCTTCAAAATGCTGAGTTTGATATTAAGAAAGAGGCAGCTTGGGCCATCTCTAATGCTACATCTGGTGGATCTCATGATCAAATCAAGTACCTGGTAAGTCAGGGGTGTATTAAGCCCTTGTGTGATCTTCTCATCTGCCCTGATCCTAGAATTGTGACTGTTTGTCTGGAGGGGCTCGAAAACATCTTGAAGGTGGGAGAAGCTGATAAAAACATGGGTAATACTGGGGGTGTGAATCTATATGCCCAACTGATTGATGATGCTGAGGGTTTGGAGAAAATTGAGAATCTACAGAGTCATGATAACACTGAGATTTATGAGAAGGCAGTGAAAATTCTGGAGACATATTGGTTGGAGGAAGAAGATGAGACTATGCCTCCAGGGGATAATGCCCAGTCAGGTTTCAACTTTGGTGGCCCTGAGGTTCCTGCCGTGCCTTCTGGGGGATTCAACTTTAATTGA | 1599 | 0.4553 | MSYRPTGNSRTEVRRNRYKVAVDAEEGRRRREDTMVEIRKNRREESLQKKRREGLQAQQMPASIHSTAVEKKLEHLPSMVAGVWTDDHNLQLESTTQFRKLLSIERSPPIEEVIQTGVVPRFVEFLMREDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLGSPSDDVREQAVWALGNVAGDSPRCRDLVLSHGALVPLLTQLNEQAKLSMLRNATWTLSNFCRGKPQPPFEQVKPALPALARLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIESGVCARLVELLLHPSPSVLIPALRTVGNIVTGDDMQTQVIINHQALPCLLNLLTNNYKKSIKKEACWTISNITAGNKLQIQAVIEANLIDPLVHLLQNAEFDIKKEAAWAISNATSGGSHDQIKYLVSQGCIKPLCDLLICPDPRIVTVCLEGLENILKVGEADKNMGNTGGVNLYAQLIDDAEGLEKIENLQSHDNTEIYEKAVKILETYWLEEEDETMPPGDNAQSGFNFGGPEVPAVPSGGFNFN | 532 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele15g0178 | 532 | PIRSF | Importin_alpha | 6 | 531 | IPR024931 | GO:0005737|GO:0006606|GO:0061608 | |
| Lele15g0178 | 532 | ProSiteProfiles | IBB domain profile. | 1 | 60 | IPR002652 | GO:0006606|GO:0061608 | |
| Lele15g0178 | 532 | Gene3D | - | 12 | 52 | IPR036975 | GO:0006606 | |
| Lele15g0178 | 532 | SMART | arm_5 | 234 | 273 | IPR000225 | GO:0005515 | |
| Lele15g0178 | 532 | SMART | arm_5 | 190 | 232 | IPR000225 | GO:0005515 | |
| Lele15g0178 | 532 | SMART | arm_5 | 149 | 189 | IPR000225 | GO:0005515 | |
| Lele15g0178 | 532 | SMART | arm_5 | 360 | 400 | IPR000225 | GO:0005515 | |
| Lele15g0178 | 532 | SMART | arm_5 | 403 | 443 | IPR000225 | GO:0005515 | |
| Lele15g0178 | 532 | SMART | arm_5 | 106 | 147 | IPR000225 | GO:0005515 | |
| Lele15g0178 | 532 | SMART | arm_5 | 275 | 315 | IPR000225 | GO:0005515 |
Showing 1 to 10 of 30 entries
Duplication type information
Functional genes information
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lele13g2238 | 13 | 28609309 | 28615981 | Lele15g0178 | 15 | 1067021 | 1070391 | hybridization | |
| Lele14g2171 | 14 | 26984703 | 26986333 | Lele15g0178 | 15 | 1067021 | 1070391 | hybridization |
Showing 1 to 2 of 2 entries