Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0175 ATGTTATTTTCCTGGACGTGGCCAAATGCGGAGATGCCTATGTTAAGAATGTTCTCTTTGTCCATAATTCGACACTTTACAATGCAGAATCATCGAGATCGAATCCGATCTACGCAGAATGATCAGTTTTGGGCCATGTCGTGGCACATCGCTTCTACATCGAAGCCGGAGTTTTCTTCCGGAAGTGTTGCAAGTAAGGGTCCACTTACTGTAGGACTACCTCCAGCTTGGGTAGATGTATCTGAAGAAATATCAGCTAATGTGCAACGTGCACGCACAAAAATGGCAGAGTTGGCCAAAGCTCATGCAAAGGCTTTAATGCCGTCATTTGGAGATGGTAAGGAGGAACAACGAACCATTGAAACTTTAACTCATGAGATAACTGACTTGATAAAGAGATCAGAGAGGCGACTGCAGAGACTTTCTGCTACCGGACCTTCTGAGGATTCCAATGTGAGGAAGAACGTGCAGCGTTCTCTTGCTACTGACCTTCAGAACCTCTCTGTAGAGCTCCGCAAGAAACAATCAAATTATTTGAAGCGACTTAGACAGCAAAAAGAGGGTCAAGATGGTGTGGATCTAGAGATGAACATAAATGGAAATAAATCCAGATTTGAAAATGATGCTTTGGACAATATGGCGTAG 645 0.4357 MLFSWTWPNAEMPMLRMFSLSIIRHFTMQNHRDRIRSTQNDQFWAMSWHIASTSKPEFSSGSVASKGPLTVGLPPAWVDVSEEISANVQRARTKMAELAKAHAKALMPSFGDGKEEQRTIETLTHEITDLIKRSERRLQRLSATGPSEDSNVRKNVQRSLATDLQNLSVELRKKQSNYLKRLRQQKEGQDGVDLEMNINGNKSRFENDALDNMA 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0175 214 MobiDBLite consensus disorder prediction 183 214 - -
Lele15g0175 214 Gene3D - 74 213 - -
Lele15g0175 214 SMART SynN_4 68 183 IPR006011 GO:0016020
Lele15g0175 214 Coils Coil 81 101 - -
Lele15g0175 214 SUPERFAMILY t-snare proteins 72 189 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0175 Lele-ChrLele15 1051771 1055445 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0175 47 214 SNARE and Associated Proteins AT3G05710 70.833 5.23e-78 235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2239 13 28622568 28625808 Lele15g0175 15 1051771 1055445 hybridization
Lele14g2172 14 26987589 26990643 Lele15g0175 15 1051771 1055445 hybridization