Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0165 ATGTCCGCGGATGGACAGAACAAAAGGAGAATAGCCATCATTGGCGTCTCTGCCGTGTTACTGGTGGCCATGGTGGTAGCCGTGACTGTCGGCATGATGTGGAAGCAATCAGATTCCTATGAGGAAGACAATAATTCCGATAAGATGTCTAACAAAGTGAAAGCAGTGCAGAGCCTGTGCGCCCCCACCGACTACAAGACAGAATGCGAGGAGAGCCTGTCGGAGGACTCCACCAATACCACCGATCCCAAAGAACTCATCATGATGGCCTTCAACGTCACCATCAAGAAAATCGAGAATGGCCTTCGTGAATCCGACACCTTGCACGAGGTGGAGAAGGATCCCCGAGCCAAGGAAGCCCTCCAGACCTGCAAGGACCTCATGGAACTTTCCATTGGTGAGTTCAGGAAATCCCTCGGAACCTTCGAGACCTTTGATTTCTACAACCTCGACAGGATTCTCATGAACCTCAAAGTTTGGCTCAGCGGAGCCATCACTTACCAGGAAACCTGCATTGAAGGCTTCGAGGAAGCCAAGAGCGACGCCGGTCAGAAGATGAAGCAGGCACTCACGGCCGCCACACACATGAGCAGCAATGGCCTCGCCATCATCAACGACTTGGCCGAAGCTTTATCCAGTCTGCACATCACAAAACAAGGAAGACGGCTGCTTAATGACCAAGAGGATGGAGGCGAAGATCATCATCACGACGAGGCAGGTGCGAACGAAGACGGCGCGAGACCCGAAGGCGACTTCGAGTTCCCCTTGTGGATCGATGAAAATCCTGCTGCTCGGAGACTGCTGACGAGCGAGCATAAAAGCAAACTGAAGCCGGATGTGGTGGTGGCGAAAGACGGGAGTGGGAAATACAAGAAAATCAAAGAGGCGCTAAAGCATGTGCCGAAGAACAACAAAAAGCCGTTTGTGATCTACATCAAGGAAGAGGAGTACAAAGAGTATGTGGAGGTGGAGAAGCACATGACGTACGTTGTGTTCGTGGGGGATGGCGGCAACAAGACCCGCATCACCGGCAACAAGAACTTCGCAGACGGGATCGGCACCTATAAGACCTGCACGGTGGCGGTAGCAGGGGACCATTTCATCGCCATCAACATGGGGATCGAAAACTCGGCCGCTCCCGACGGACATCAGGCCGTTGCATTGAGGGTTCAATCCGACTTCTCCATATTCTACAGATGCCAATTGGATGGGTACCAGGACACGCTGTACGCGCACACCATGCGTCAATTCTACAGGGACTGCGTCATCACCGGCACCATAGACTTCATCTTCGGGGACGGCGCCGTCGTGATGCAGAACTGCACGTTCGTGGTGAGGAAGCCGAACGAGAACCAGCAGTGCATAGTGACGGCGCAAGGGAGGAAGCAGAGGCACCAACCGTCGGCGCTAGTGATCCAAGGAGGGTCCATAGTGTCGGACCCAAAGTTCTATAAAGTGAGGTTTGAGAGCAAGGCGTACCTAGCGCGGCCATGGAAGAACTTCTCAAGGTTGATCATATTGGAAACCTTCATAGATGACCTGATACAGCCAGAAGGGTTTCTCAAGTGGGACGCTAACTCCACATCGTACAAGACATGCTGGTACGGCGAGTTCAACAACACAGGGCCAGGCGCCGACATGAGTCATCGCGTCAAGTGGAATGGGATCAAGAATCTGACGGCACAGCATGCTCTGGATTTCACGCCCTTGAGGTACTTCAAGACAGATTACTGGATTAGGGAAACTAGGATCCCTTACAATCCCGGCGCCATGTCCTCCCCTCCATTTACCGCTAAGAAGCTCTCCTCTCAGTGA 1815 0.5295 MSADGQNKRRIAIIGVSAVLLVAMVVAVTVGMMWKQSDSYEEDNNSDKMSNKVKAVQSLCAPTDYKTECEESLSEDSTNTTDPKELIMMAFNVTIKKIENGLRESDTLHEVEKDPRAKEALQTCKDLMELSIGEFRKSLGTFETFDFYNLDRILMNLKVWLSGAITYQETCIEGFEEAKSDAGQKMKQALTAATHMSSNGLAIINDLAEALSSLHITKQGRRLLNDQEDGGEDHHHDEAGANEDGARPEGDFEFPLWIDENPAARRLLTSEHKSKLKPDVVVAKDGSGKYKKIKEALKHVPKNNKKPFVIYIKEEEYKEYVEVEKHMTYVVFVGDGGNKTRITGNKNFADGIGTYKTCTVAVAGDHFIAINMGIENSAAPDGHQAVALRVQSDFSIFYRCQLDGYQDTLYAHTMRQFYRDCVITGTIDFIFGDGAVVMQNCTFVVRKPNENQQCIVTAQGRKQRHQPSALVIQGGSIVSDPKFYKVRFESKAYLARPWKNFSRLIILETFIDDLIQPEGFLKWDANSTSYKTCWYGEFNNTGPGADMSHRVKWNGIKNLTAQHALDFTPLRYFKTDYWIRETRIPYNPGAMSSPPFTAKKLSSQ 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0165 604 FunFam Pectinesterase 273 590 - -
Lele15g0165 604 ProSitePatterns Pectinesterase signature 2. 423 432 IPR033131 -
Lele15g0165 604 FunFam Pectinesterase 52 208 - -
Lele15g0165 604 PANTHER PECTINESTERASE 16 580 - -
Lele15g0165 604 Pfam Plant invertase/pectin methylesterase inhibitor 55 203 IPR006501 GO:0004857
Lele15g0165 604 Pfam Pectinesterase 279 574 IPR000070 GO:0030599|GO:0042545
Lele15g0165 604 Gene3D Invertase/pectin methylesterase inhibitor family protein 51 209 IPR035513 -
Lele15g0165 604 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 55 207 IPR035513 -
Lele15g0165 604 Gene3D - 273 590 IPR012334 -
Lele15g0165 604 CDD PMEI-like_3 58 208 - -
Lele15g0165 604 SMART PMEI_2 51 203 IPR006501 GO:0004857
Lele15g0165 604 TIGRFAM PME_inhib: pectinesterase inhibitor domain 50 207 IPR006501 GO:0004857
Lele15g0165 604 SUPERFAMILY Pectin lyase-like 277 587 IPR011050 -
Lele15g0165 604 MobiDBLite consensus disorder prediction 225 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0165 Lele-ChrLele15 1009624 1011438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0165 4 603 Carbohydrate Esterase AT3G05610 46.179 0.0 568