Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0162 ATGGGCCTTCTCGACCAACTGTGGGATGATACCGTCGCCGGCCCTCAGCCCGAGAACGGTCTCGGAAAGCTCCGAAAGCACAAGACCTTCAGTGCCCGAGCTACAGGGTCCGGCAAGGAATCATACGAGGGAAGCGCGAGATCTTACGAGGAGGAATCGGCGGAGGAGGCGTTGAGAGTGACGCGTCGCATCATGATCGTAAAACCACCGGGGTACCAGAGTGGATCGCCTCCAGTTTCACCTGCGGGTTCTACTCCGCCGGTGTCTCCGTTTTCGGGAGCAAAAGAGTCGTTCCGGTTTCGTAGAAGGTCGACCTCAGATGCGTGCGAGAAGCCGAGCCAGAACAGATCATCAAGCTCTTCTTCTCCTTTCGATGTGTGA 381 0.5722 MGLLDQLWDDTVAGPQPENGLGKLRKHKTFSARATGSGKESYEGSARSYEEESAEEALRVTRRIMIVKPPGYQSGSPPVSPAGSTPPVSPFSGAKESFRFRRRSTSDACEKPSQNRSSSSSSPFDV 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0162 126 MobiDBLite consensus disorder prediction 110 126 - -
Lele15g0162 126 MobiDBLite consensus disorder prediction 68 126 - -
Lele15g0162 126 MobiDBLite consensus disorder prediction 1 54 - -
Lele15g0162 126 Pfam Dormancy/auxin associated protein 7 86 IPR008406 -
Lele15g0162 126 PANTHER DORMANCY-ASSOCIATED PROTEIN 1 1 121 IPR008406 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0162 Lele-ChrLele15 999038 1000200 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele15g0162 15 999038 1000200 Lele05g0203 05 1095429 1096886 CCT
Lele15g0162 15 999038 1000200 Lele06g0011 06 66882 68312 CCT
Lele15g0162 15 999038 1000200 Lele07g0206 07 1104465 1105912 CCT
Lele15g0162 15 999038 1000200 Lele08g0012 08 62693 64118 CCT
Lele13g2250 13 28677737 28680628 Lele15g0162 15 999038 1000200 hybridization
Lele14g2184 14 27029900 27033086 Lele15g0162 15 999038 1000200 hybridization