Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0152 ATGGCTTCTGCTTCTGAGGCGTTAAGCTCCATCTTCTTGCTCTTGATGTTCCTATCTTTTCAAAGAACCCACATTTTGTTTGTGGATGCTCTGTTTCACCCGGCAGGAAACTTCCATGTCCATGTCCTATCAGCGAACGGACAAGAAAATGACAACCAAGTTAAGGAAATCTCTGGACAAGATGAGAATGGTGGCAAGAGGCTTCTGACAGTGGAAAAGTTCAGAGCTTTGCTCGGACTCTACAGTTTCCAAACCAGAAGGCTATCAAATGGCGATTCTGAGTTTCTCTCCCCATCACCTTCTCCTTCACCTAACCCTGAACTTGAGCCTCCATCCCCATCTCCATCTCCTCTTCCGTTACCTCATGCGTTTGCTCATCCCTTTCCTTCACGACATCGTCCCCGTTTTAATCCATCAGCTCGCAAGTTCCAACATAAAGATAGAGACAGAGCTCAAGCAATACTTGTAGGTGTTCTTGCGTCTGTGGGGGTTGCTACAGTGCTTTGTGCTCTTGGGCTTATCTGTTTTTTCAGAAAGTGCAGAAAGCATGCAAGGAAACCCAAAAGGACAATGCCACTCTGTAGCAAGAATGGAGAAAACGGAGGTTCTTATGAAAACTCGTCAAGTCAGCTGGGTTTGAACTCTGCCATAGATCTATTTTATCTGAATGCTTTAGGCGACGATATAGAGCAACACACATGCAGCTTGAAAAAGACTTCTGAAACAGTAAATACAAGCTCGGATCACAGCTCCATCCCTAAATGTGCAATTTATGAGAAGATGGAATTAAATCAAGAAGTGATCAGTTCAGGATACGATAATGCTAGCAGTTCTTCCACAAAGGAAATTCTATCTATTCATGAGGACGCTGAATCGGGGAAAGATGAATCCGAATATGATGATGGGGGAGATCAAGTTATTACCATGGAACGCCATTCATCAGAGACTGAAAGTTTTCATTCCTTCGCCGATTCCCACTCGTCAAATGTCAGACTTTCCGATGCGTCAGCGGGCAGTGTGCCTGAGACAGTGTCCCCGTCGCCTCGAGCATCTCAGTCTAATTCTATCAGTTCGCTGATTCCATTCACAAAGGAAATTCCTCATTCGCCCCAAACTTCAACTTCAAAGATAGAATCTCCTCAACCACCATGCATTACAAAGCAGGAACAGCAAGGGATTGAAACTCGTTCACAACGTGCCCAAGCCACCACGCCTCCGCCGCCGCCCCCACCTCCAACTCTACAAATGCCCTTGTTTTCTTTGCATTCTCTTCCTTCTTCATCAAGAATTTCCTCCGACTCTCCACTTTCTTCATCATCTCCAAGAAACTCGGATTCTAACTCAGCATTGAATCGAAGCGGGGTAAATGAGTCGCCTCGTCCTACTCAACATCCCCCTGCAAGATCGCCACCTACCGTTCCCCCACCTCCCTGTCCATCACCGCCCTTCAAAGCTTATAACAACAATATGAAAACTCCACCTCCTCCTCCATCTCAGCTTCCCCAGTTTACGCCTCTGGGAAAAGATGGAGCCCCGCTACCAAAACTTAAACCACTTCACTGGGACAAAGTAAGAGCTGCCCCGGATCGCACGATGGTTTGGGACAAACTTCGAACAAGCTCATTTGAGTTTGATGAGGAAATGATCGAGTCACTTTTTGGCTACAATTTGCAAAATTCAATGAAGAAAGACGATACAAAGAGCAAAAGTCCTTCTCCAACCAAACACCTACTCGAGCCGAAGAGGCTGCAGAACATTACAATTCTCTCAAAAGCTCTGAATGTGACGGCTGAACAAGTATGTGAAACCCTAATACAAGGTAAGGGCCTCGCTTTACAACAGCTAGAGGCACTGGTAAAGATGGTGCCCACCAAGGAAGAAGAGGATAAGCTCTCTAATTATAGAGGAGACATCAATGATTTGGGATCCGCGGAAAAGTTTGTAAGAGCAATGCTGAGCATACCCTTTGCCTTTCAACGTGTTGAAGCAATGCTTTACAGAGAAACCTTTGAGGATGAGATTGTCCGCCTCAGGAACTCTTTTTCAATGCTCGAGGAGGCGTGCAAGGAACTAAGATCAAGTAGGCTCTTCTTGAAATTACTTGAAGCTGTGCTGAAAACAGGAAACCGTATGAATGTTGGGACAATAAGAGGAGGTGCCAGAGCATTCAAGCTCGATGCCCTTCTCAAGCTAGCTGATGTTAAGGGAACTGATGGGAAAACTACGTTACTCCATTTTGTTGTTCAGGAGATTGTTCGATCAGAAGGAATCAGAGTTTCGGATAGCATTATGGGGAAAATCAGCCAGAAAAGTAAGAACAGAACGGAAGAAGAGAAGGAAGATGGTTACAGAAGAATGGGATTAGAACTTGTTTCTGGTTTGAGTACTGAGTTATACAACGTAAAGAAGACAGCGACAATCGACTTGGACGTTCTGGCCAGCTCTGTCTCAAACCTCAAAGATGGAATGGCCAAGCTGCAATATCTGGTGCAGGAGTTACATAGGGATGAAAAAAGTGAGAACTTTGTGAATTCGATGAAGGCTTCCCTAAATTATGCAGAGAGAAATGTAAGGGAGCTGCAAGGAGATGAAGATAGAGTACTAGCTCGTGTGAAAGAAATCAGAGAGTATTTTCATGGGGATGTGAGCAAAGAAGACGCAAATCCACTTCGAATATTTGTGATTGTAAGAGACTTTATGGGCATGTTGGATAATGTATGTAAAGAACTCAGAAGGTGCCAAGCTCCTCGCACCCCAAATCCTCTCGCTCCATTCAGGTAG 2781 0.4498 MASASEALSSIFLLLMFLSFQRTHILFVDALFHPAGNFHVHVLSANGQENDNQVKEISGQDENGGKRLLTVEKFRALLGLYSFQTRRLSNGDSEFLSPSPSPSPNPELEPPSPSPSPLPLPHAFAHPFPSRHRPRFNPSARKFQHKDRDRAQAILVGVLASVGVATVLCALGLICFFRKCRKHARKPKRTMPLCSKNGENGGSYENSSSQLGLNSAIDLFYLNALGDDIEQHTCSLKKTSETVNTSSDHSSIPKCAIYEKMELNQEVISSGYDNASSSSTKEILSIHEDAESGKDESEYDDGGDQVITMERHSSETESFHSFADSHSSNVRLSDASAGSVPETVSPSPRASQSNSISSLIPFTKEIPHSPQTSTSKIESPQPPCITKQEQQGIETRSQRAQATTPPPPPPPPTLQMPLFSLHSLPSSSRISSDSPLSSSSPRNSDSNSALNRSGVNESPRPTQHPPARSPPTVPPPPCPSPPFKAYNNNMKTPPPPPSQLPQFTPLGKDGAPLPKLKPLHWDKVRAAPDRTMVWDKLRTSSFEFDEEMIESLFGYNLQNSMKKDDTKSKSPSPTKHLLEPKRLQNITILSKALNVTAEQVCETLIQGKGLALQQLEALVKMVPTKEEEDKLSNYRGDINDLGSAEKFVRAMLSIPFAFQRVEAMLYRETFEDEIVRLRNSFSMLEEACKELRSSRLFLKLLEAVLKTGNRMNVGTIRGGARAFKLDALLKLADVKGTDGKTTLLHFVVQEIVRSEGIRVSDSIMGKISQKSKNRTEEEKEDGYRRMGLELVSGLSTELYNVKKTATIDLDVLASSVSNLKDGMAKLQYLVQELHRDEKSENFVNSMKASLNYAERNVRELQGDEDRVLARVKEIREYFHGDVSKEDANPLRIFVIVRDFMGMLDNVCKELRRCQAPRTPNPLAPFR 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0152 926 MobiDBLite consensus disorder prediction 99 124 - -
Lele15g0152 926 MobiDBLite consensus disorder prediction 312 514 - -
Lele15g0152 926 MobiDBLite consensus disorder prediction 402 416 - -
Lele15g0152 926 MobiDBLite consensus disorder prediction 320 401 - -
Lele15g0152 926 Gene3D Formin, FH2 domain 530 918 IPR042201 -
Lele15g0152 926 Coils Coil 667 687 - -
Lele15g0152 926 Pfam Formin Homology 2 Domain 510 903 IPR015425 -
Lele15g0152 926 PANTHER FORMIN-RELATED 20 918 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lele15g0152 926 Coils Coil 843 863 - -
Lele15g0152 926 MobiDBLite consensus disorder prediction 463 502 - -
Lele15g0152 926 ProSiteProfiles Formin homology-2 (FH2) domain profile. 506 926 IPR015425 -
Lele15g0152 926 SMART it6_source 506 918 IPR015425 -
Lele15g0152 926 MobiDBLite consensus disorder prediction 91 144 - -
Lele15g0152 926 MobiDBLite consensus disorder prediction 419 462 - -
Lele15g0152 926 SUPERFAMILY Formin homology 2 domain (FH2 domain) 474 914 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0152 Lele-ChrLele15 928517 931836 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0152 491 926 FH2 protein (formin) Gene Family AT3G05470 74.091 0.0 663
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele15g0152 15 928517 931836 Lele13g2267 13 28790602 28795113 CCT
Lele15g0152 15 928517 931836 Lele14g2203 14 27134674 27137374 CCT
Lele15g0152 15 928517 931836 Lele15g0145 15 870825 875340 CCT
Lele15g0152 15 928517 931836 Lele15g0152 15 928517 931836 ECH
Lele13g2258 13 28738731 28742075 Lele15g0152 15 928517 931836 hybridization
Lele14g2194 14 27089954 27093750 Lele15g0152 15 928517 931836 hybridization