Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0151 ATGTATGGTAAGGACGTATCTTCCGATCAAGTCATTGCAGAAATGCTAGAAATGGGGTTTCAATATGCCAATATTATGGAAGCTTTGAAAGCAGTAGGTCCATCTACTCATAGTGCTGTGGGGTTTATCCTGAATAATGCTGGTAGAAATAGCGGTAGAGCATCTCCTGCTAATATTAATAATTCCAAATTTCTTAAGGGCAACGAAGAGGGTCTCAGAAAAAGGGACTTGGCATCATCCCATTACGTAAGTTATGTTCGACAGTCTAGCATCCTGGACCATGTCCAAGCCACTAATAAATCCACAAAAGGAAAGACGGATATTGTACTTGGTGCACCCTTTAGTAGGTTGGAAGTTCCTTCAGGCAATGTGGAAGAGCTCAAGGAGCCTTTCACTGATATGGATGTTTATTCCAATATATTGTCAGAAAATTGTAAGGTTGATTCCCTGGATGAGTTGGATGGTTCATCAGATTGGGAGCAGAAAGCTAGCAATCTCTTGCAAGAGCATTTTGGCTTTTCAAGCTTAAAGAGTTTTCAAAAGGAAGCCCTGACTGCTTGGGTAACTCATAAAGACTGTCTTGTCCTGGCTGCAACTGGATCTGGAAAGTCTTTGTGCTTTCAGATTCCTGCATTGCTATCTGGGAAAATGGTGGTTGTGATTTCACCCTTAATAAGCCTGATGCATGATCAATGCTTAAAGCTAGCAAGACATGGGATCAGCGCTTGCTTTCTTGGGTCTGGGCAACCTGACAATACTGTTGAACAGAAAGCAATGAGAGGCATGTATAGTATAGTGTATGTATGCCCAGAGACAGTTCTAAGATTGATTGAACCACTACAGAAGCTTGCAAAAAGTCGCGGTATTGCTTTATTCGCAATCGATGAAGTGCATTGTGTTTCTAAATGGGGCCATGATTTCCGGCCAGACTACAGACGACTGTCTGCATTAAGGGAAAATTTCAGTACTAGCAAGCTAGAATTCCTGAAATTTGATATACCTCTGATGGCTTTGACTGCTACAGCTACCAACCTGGTTCGAAAGGATGTTTTAAATTCGCTACATATGTCAAAAGGGACAAAGATTGTTCTCACTTCCTTTTTCCGGCCTAATTTACGGTTCATTGTAAGGCATAGTAAGACATCTCCATCTTCTTACGGGAAAGATTTTAATGAGCTAATTGAACTATATGGTAAAAAGCAAAAGTCAGATGACAAGAAAAAAGTTTTTATATCAGAGGAATCGCCTGATGTTCTCATTAGCTCTGATGCCAGTAGAATCTGTGAGGTTGACAGTCTTCCTCCTTATCATTTGGATGGTGACCAAGATGATTACAGTGAAGGAGGTATTAGTGTATTGCATTCAAGAAGCACTAGTGGTGCTATAAATGGAAAAGAATTGTCAGTTGAGTACCTGGAAAACGACATTGACGTCTTTCAAAGTGTGGATGACTGGGATGTTGCCTGTGGTGAATTCTGTGGACAACCTTCTCAAAAGGAATGGAAGTTATCTGAGATTGTTGATCCACCCAAGAAATCAGAAGAAAGACTTAGACTTCTTAAAGAGCCTTTAGAGCGAGGACCAACTATCATATATGTACCCACCAGAAAAGAAACACTGAACATTGCAAATTATCTATGTGAATTTGGTGTGAAGGCTGCTGCTTATAATGCATCGCTGCCCAAAACACATCTAAGAAGGGTACACAAGGAGTTTCATGAAAACACATTAGAGGTTGTTGTTGCAACAGTGGCTTTTGGAATGGGGATTGATAAATTAAATGTCAGAAGAATCATCCATTATGGTTGGCCACAGAGTTTAGAAGCCTATTACCAAGAAGCTGGTCGTGCCGGACGAGATGGTAAATTAGCAGATTGCATTCTTCATGCAAACCTATCAAGGGAACCGTCACTTTTGCCCAGTCGTAGAAGTGAAGATCAGTTAACACATGCCTATGTCATGTTGTCTGATTGTTTCAGATATGGAATGAATACTTCATCTTGTAGAGCAGAGGCTCTCGTGAATTACTTTGGAGAGGACTTCCATAATCAAAAGTGTCTCATATGTGATGTGTGTGTTGATGGACCACCTCAAATGCAAAATCTGAGAGAGGAGGCATGTACTTTACTACAAGCTGTAGCTGAACATTATGGTCAAAGCTCTGATGTAGATGGCTTATATGATGAAGATGTACATTTTGACCCTGAAGAAAGAAGAATTAAGGGGAGGCTTAGTCTTAATATGGTTGTTAGGAAGATAAGGGAGCAGTCTCAAAAATTTTTGACCACTGATATGTTATGGTGGAGAGGTCTCGCTCGAGTTATGGAACAGAAAGGATACATCAGGGAGGGAGATGCCAAGAGCCATGTGCAGATTAAGTACCCAGAACCAACAGAAGTGGGATTGAAATTCGTCAAGTCAAATAGTGAGCAATCTTTCTATGTTTACCCCGAGGCAGATATGCTGCTTGCGGCCAAAAGCAGCCATGGCAAACCATTCTCCTCATTCTCGGACTGGGGAAGAGGTTGGGCTGATCCTGAGATTCGTCGCGAGCGGCTCCAAAGAATGCAACTCAATAGGAAGTCACCGAAGCTGCCGAGTCCTAGAAAGTCACGCAAGAGAAAAGCTATTAGAATGAAGCCTGATCTGAGGACTTGTCGTGGGAGACTAGCTGCAAAACTCTCTAAACGTACGTGA 2697 0.4168 MYGKDVSSDQVIAEMLEMGFQYANIMEALKAVGPSTHSAVGFILNNAGRNSGRASPANINNSKFLKGNEEGLRKRDLASSHYVSYVRQSSILDHVQATNKSTKGKTDIVLGAPFSRLEVPSGNVEELKEPFTDMDVYSNILSENCKVDSLDELDGSSDWEQKASNLLQEHFGFSSLKSFQKEALTAWVTHKDCLVLAATGSGKSLCFQIPALLSGKMVVVISPLISLMHDQCLKLARHGISACFLGSGQPDNTVEQKAMRGMYSIVYVCPETVLRLIEPLQKLAKSRGIALFAIDEVHCVSKWGHDFRPDYRRLSALRENFSTSKLEFLKFDIPLMALTATATNLVRKDVLNSLHMSKGTKIVLTSFFRPNLRFIVRHSKTSPSSYGKDFNELIELYGKKQKSDDKKKVFISEESPDVLISSDASRICEVDSLPPYHLDGDQDDYSEGGISVLHSRSTSGAINGKELSVEYLENDIDVFQSVDDWDVACGEFCGQPSQKEWKLSEIVDPPKKSEERLRLLKEPLERGPTIIYVPTRKETLNIANYLCEFGVKAAAYNASLPKTHLRRVHKEFHENTLEVVVATVAFGMGIDKLNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADCILHANLSREPSLLPSRRSEDQLTHAYVMLSDCFRYGMNTSSCRAEALVNYFGEDFHNQKCLICDVCVDGPPQMQNLREEACTLLQAVAEHYGQSSDVDGLYDEDVHFDPEERRIKGRLSLNMVVRKIREQSQKFLTTDMLWWRGLARVMEQKGYIREGDAKSHVQIKYPEPTEVGLKFVKSNSEQSFYVYPEADMLLAAKSSHGKPFSSFSDWGRGWADPEIRRERLQRMQLNRKSPKLPSPRKSRKRKAIRMKPDLRTCRGRLAAKLSKRT 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0151 898 Gene3D - 503 629 IPR027417 -
Lele15g0151 898 SUPERFAMILY UBA-like 8 47 IPR009060 GO:0005515
Lele15g0151 898 Pfam DEAD/DEAH box helicase 179 344 IPR011545 GO:0003676|GO:0005524
Lele15g0151 898 Gene3D - 633 815 IPR036388 -
Lele15g0151 898 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 242 IPR027417 -
Lele15g0151 898 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 215 631 IPR027417 -
Lele15g0151 898 MobiDBLite consensus disorder prediction 856 880 - -
Lele15g0151 898 PANTHER DNA HELICASE RECQ FAMILY MEMBER 154 415 - -
Lele15g0151 898 FunFam ATP-dependent DNA helicase 632 810 - -
Lele15g0151 898 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 5 46 IPR015940 -
Lele15g0151 898 SMART helicmild6 540 621 IPR001650 -
Lele15g0151 898 SMART ultradead3 172 377 IPR014001 -
Lele15g0151 898 FunFam ATP-dependent DNA helicase 146 368 - -
Lele15g0151 898 Pfam RecQ zinc-binding 643 692 IPR032284 -
Lele15g0151 898 Gene3D - 137 368 IPR027417 -
Lele15g0151 898 CDD DEXHc_RecQ 167 367 - -
Lele15g0151 898 MobiDBLite consensus disorder prediction 865 880 - -
Lele15g0151 898 Pfam Helicase conserved C-terminal domain 517 620 IPR001650 -
Lele15g0151 898 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 512 667 IPR001650 -
Lele15g0151 898 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 184 360 IPR014001 -
Lele15g0151 898 TIGRFAM recQ_fam: ATP-dependent DNA helicase, RecQ family 166 395 IPR004589 GO:0004386|GO:0006310
Lele15g0151 898 FunFam ATP-dependent DNA helicase 503 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0151 Lele-ChrLele15 921561 927798 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0151 498 621 Eukaryotic Initiation Factors Gene Family AT5G11170 27.419 1.86e-06 49.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2259 13 28743415 28749568 Lele15g0151 15 921561 927798 hybridization
Lele14g2195 14 27094057 27095699 Lele15g0151 15 921561 927798 hybridization