Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0136 ATGAAGGTAGGTCTGGTGAATTTGGTGGTGGCTAATTTGGCAGTGGAGGGTGGGTGGTTGAAGTTGGAAGGTGATAATCATAGGGAAGTGTATGTTGTGTTCATGCCAAAATGTTGTCCCATGATTGAGATTTTCAGATGTGATGATCTTCTGATGCATCAAGGTGATTATTGGGTTTACAAGCCTGAATTAACAAGGCTTAAGCAGAAAACTCTTATGCCTCCTGGATCATGCCAGATCGCTCCTGCTTATGCACAAACGGGCAAAGAGGTTTGGAGAGCTTATTTGTCAGAATTGAAGGTATTGAAGCAGGACCAAAGGCCAAAACTGGCGTATGTCACGGTGCTTCACTCTTCAGAAGCCTATGTGTGTGGAGCGATTGCTTTAACCCAAAGCATTCTTCAAACCCCACAGAGCGTCATTCAGTTCTATGACTACACCAGAGACCTCATCCTCCTCGCAGACGATTCAATCAGTCCCAAATCCATGAAAGGCCTTCAAGCTGCAGGATGGAAGATCAAGCGCATTCAACGCATCCTAAATCCCTTTGCCCAGAAAGATTCTGACTTCCTAGTGCTGAAAAACACGGACGATTTCTTCGTCTACCCTCAGTTATCAGCCACACCTAATGACCACATATTCTTCAATTCTGGATTGATGATAATAGAGCCATCCAAGTGCATGTTTGAGGAATTAATGACGAGGGTTTCACGATTAGAGTCGTATAATAAAGGTGACCAGGGATTTTTGAACGAGGTCTTCACATGGTGGCACAGGTTGCCAAGCAGGCTAAATCATTTGAAGTATTCGAGGGAGATAGAAGAAGATGAACTGTATGGGATGCATTATCTGGGGGTGAAGCCATGGATGTGTTATAAGGATTATGACTGCAATGGGGACATAGAGGATCGTCGTGTGTTTGCGAGTGACTCGGCTCACAAGTTGCGGTGGGACGTGTATGAGGAAATGGCACAAGAGCTGCAATCATACTGTGGGCTTAGCCGGAGAATGGAGGAAAGAATACTCAAGCGGAGAAGAAGAGCTAGAGATGCTAATTTCTCTGATATGCATTGGAACATAGAGATTAAGGATCCTAGAATTAAATTAGGAAAGCCCCACGTTTGTCCAAATGCCACAGAAAAGAAGGAAGAAGAAATGGAAAACTCGCGCCATTGTAGCCACAAGCTTAGGCAGGCCAGAATGGAATGGTGCAGCTCGAGCGGCTTAAGCCCTACGATGACTCTTCCATTTCAAAATACCGTTACTCATCTCACTTGTCGCAGTTTTCGCCCGTTCCCTGTAAAGCATCCGATTCTAGGTTCTTCTCGATTTAGAGTGAATTGCAGAGAGCCAGCTCATGACGATACTCCTCTCTCCGTTGCTTCCGCTTACTCTGTCCTCGGAGTACACCCCGATTGCTCTGCTCTCGAATTGAAATCTGCTTTTCGAGCCAAGGTGAAGCAGTTCCATCCCGATGTGATCAAAGACGGAACAAATTCAGACGCTATGATTCGCCGTGTAATCCAGGCATACGAGATGCTGTCCAGCTACAGCCGGTCAGAGATAATTGAAAGGGAATGCTTAGATCCATTTGACAAACCAGAATGTGAAGCTGTTGATATTTTTGTCAACGAGGTGCTTTGTGTTGGGAAAGCATGTTCAAATTCATGCGTGAACAGAGCGCCTCATGCTTTCACATACGTCTCTTCAACTGGAACAGCACGTGCATCTTCTCAAGGTCATGGCGAAGATTACCAAGTTCAACTCGCTGTTGGTCAATGCCCAAGAAGTTGCATTCATTATGTTACCCCATCACAAAGAATTATCTTAGAGGAGCTACTTGACAGAATACTGAATACACCCTTTTGTGATACGTCGACTGAGGCAGAATTGCTCTACTCACTTATAACGAAAGCCAGATATGAGAATAACAGATACCAAAAGCCGAAGAAGCAACCGAAAACTTCAAGCCAGCATGTGGATTGGTTTTAA 1992 0.4488 MKVGLVNLVVANLAVEGGWLKLEGDNHREVYVVFMPKCCPMIEIFRCDDLLMHQGDYWVYKPELTRLKQKTLMPPGSCQIAPAYAQTGKEVWRAYLSELKVLKQDQRPKLAYVTVLHSSEAYVCGAIALTQSILQTPQSVIQFYDYTRDLILLADDSISPKSMKGLQAAGWKIKRIQRILNPFAQKDSDFLVLKNTDDFFVYPQLSATPNDHIFFNSGLMIIEPSKCMFEELMTRVSRLESYNKGDQGFLNEVFTWWHRLPSRLNHLKYSREIEEDELYGMHYLGVKPWMCYKDYDCNGDIEDRRVFASDSAHKLRWDVYEEMAQELQSYCGLSRRMEERILKRRRRARDANFSDMHWNIEIKDPRIKLGKPHVCPNATEKKEEEMENSRHCSHKLRQARMEWCSSSGLSPTMTLPFQNTVTHLTCRSFRPFPVKHPILGSSRFRVNCREPAHDDTPLSVASAYSVLGVHPDCSALELKSAFRAKVKQFHPDVIKDGTNSDAMIRRVIQAYEMLSSYSRSEIIERECLDPFDKPECEAVDIFVNEVLCVGKACSNSCVNRAPHAFTYVSSTGTARASSQGHGEDYQVQLAVGQCPRSCIHYVTPSQRIILEELLDRILNTPFCDTSTEAELLYSLITKARYENNRYQKPKKQPKTSSQHVDWF 663
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0136 663 SUPERFAMILY Nucleotide-diphospho-sugar transferases 109 328 IPR029044 -
Lele15g0136 663 CDD DnaJ 464 515 IPR001623 -
Lele15g0136 663 Gene3D DnaJ domain 453 534 IPR036869 -
Lele15g0136 663 PANTHER GLYCOGENIN SUBFAMILY MEMBER 6 184 - -
Lele15g0136 663 SUPERFAMILY Chaperone J-domain 460 523 IPR036869 -
Lele15g0136 663 SMART dnaj_3 461 519 IPR001623 -
Lele15g0136 663 Gene3D - 540 602 - -
Lele15g0136 663 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 108 186 IPR029044 -
Lele15g0136 663 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 187 328 IPR029044 -
Lele15g0136 663 ProSiteProfiles dnaJ domain profile. 462 532 IPR001623 -
Lele15g0136 663 Pfam DnaJ domain 463 517 IPR001623 -
Lele15g0136 663 PRINTS DnaJ domain signature 464 482 IPR001623 -
Lele15g0136 663 PRINTS DnaJ domain signature 499 519 IPR001623 -
Lele15g0136 663 PRINTS DnaJ domain signature 482 497 IPR001623 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele15g0136 Lele-ChrLele15 806623 812851 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0136 6 368 Glycosyltransferase AT1G08990 49.005 2.37e-125 381
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele15g0136 15 806623 812851 Lele13g2283 13 28886369 28887045 CCT
Lele15g0136 15 806623 812851 Lele14g2217 14 27236368 27237092 CCT
Lele15g0136 15 806623 812851 Lele15g0131 15 781031 786089 CCT
Lele15g0136 15 806623 812851 Lele16g0139 16 805316 812038 CCT
Lele15g0136 15 806623 812851 Lele15g0136 15 806623 812851 ECH
Lele13g2275 13 28850427 28852639 Lele15g0136 15 806623 812851 hybridization
Lele14g2210 14 27187640 27195523 Lele15g0136 15 806623 812851 hybridization