Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0133 ATGAGTGTTGATCTGGAATCGTTAGCGGAGGCGACCTCTGGCGCCATAGGATCACTCTTGAGCACGACCATCTTGTACCCGCTTGACACCTGTAAGACCAAGTACCAAGCCGAGGCTCGGGTTCATGGCCGCCAAAAATATAGTAACCTCTCTGATGTGTTATGGGAAGCAATATCTTCCCGTCAGGTGCTTTCGCTTTATCAGGGTCTGGGAACAAAAAACCTTCAATCCTTCATTTCGCAGTTTGTCTACTTCTATGGCTACAGCTACTTTAAAAGAATGTATCTGCGGAAGAGCGGTTCTAAGCGTATTGGAACCAAAGCAAACTTGGTCATTGCTGCTGCTGCTGGGGCCTGCACTGCCATTGTGACTCAGCCCCTGGATACAGCCTCTTCAAGGATGCAGACGAGTGATTTTGGAAAATCTAAAGGTCTTTTGAAGACCCTTACAGAAGGCACTTGGAGCGATGCATTTGATGGTCTCAGCATTTCCTTACTGCTGACCTCAAACCCAGCAATCCAGTATACAGTTTTTGATCAGCTGAAACAACGAGCCCTGAAGAATCAGGAAAACAGCGTAGACAGAGGATCATCTCCAGCATCCCTTTCTGCATCTATGGCCTTTCTCTTGGGAGCTATTTCGAAGAGTGTTGCTACCGTCTTAACGTATCCAGCTATCAGGTGCAAGGTGATTATTCAAGCTGCAGACAATGAGGAAAAATCAGCCTCGAAACCACAGAAAAAGCCAGGGAAAACAGTTTGTGGAGTTCTCTGGGCTATATGGCAAAGGGAGGGCTTACCGGGTTACTTCAAAGGATTGCATGCTCAAATCTTAAAGACTGTTTTGAGCTCAGCATTGCTTTTGATGATAAAGGAGAAGATATCTGCCACTACTTGGGTACTTATACTTGCAATTAGAAGGTTACTGTTGCTCCCAAAGGGTAGATTGTATGTGAGCAGTGAGGAGAGGAAATCTGCAGGAGCAGGAGGAAGACCAAAGTACAGGAGACACAAGATGATGTCAGGAAAGTATACAACAATTGATGATCAAAATGTTTCGGGATCTGTACCTGCTGTTTCAGATCCGGGACAAGTTACCGTGAAGTTCACAGACACCAATCTTCAGACATTTCCTCCCTCTGTACCATCAGGGAAGATTTCTGGTGGTTCGTGGCCTCCTCGTGATACTGATGGTACATTTTCCAATCCTGTATACGGTTCTGATCAATCCCAGCAGGGTGGCTGGATTCGAGCTTTCACAGTAGCTGCATACAAACCGTACTTTGATATTGACACTTCAGATGTTCTTGAGAGGATTAAAGAGTCACTCTTTCCATTTAGAGGAACCTTCAATGAAAAAATCGCTAGCAATCCTGATCTGTATGGGCCTTTCTGGATCTGTACTACTTTAATATTTGTAGCAGCCTCTATTGGCACATTTGTGACATATATAGCACACAAGTTGAAGAACAAGGAATCGAGCTATGACATAAATCTGGTGACTTGGGCAGCTGGTTTGTTTTATGGTTATGTCACCATCGTTCCTCTTTGCCTGTATGTAATCCTCAAATACTTATCTGCACCATCCAGCCTTGTTCAATTATTCTGTCTCTACGGATATTCCATTTTTGTCTTTATTCCGGCTTTGTGCATGTCGATTGTGCCATTGGAGACCTTCAGATGGGCGATTGCAGGTGTGGCTGGATTAATGTCTGCAACATTTGTGGCACTTAACCTCCGTGCACATATAGAATCTGCAGGAGAAAGGTGGTTCTTGATTGTTGCTGGCATCTTTGTATTGCAGCTGGCTCTAGCTGTTGTCCTAAAGTTGTATCTCTTCGCAGTATCAGTTTGA 1854 0.4461 MSVDLESLAEATSGAIGSLLSTTILYPLDTCKTKYQAEARVHGRQKYSNLSDVLWEAISSRQVLSLYQGLGTKNLQSFISQFVYFYGYSYFKRMYLRKSGSKRIGTKANLVIAAAAGACTAIVTQPLDTASSRMQTSDFGKSKGLLKTLTEGTWSDAFDGLSISLLLTSNPAIQYTVFDQLKQRALKNQENSVDRGSSPASLSASMAFLLGAISKSVATVLTYPAIRCKVIIQAADNEEKSASKPQKKPGKTVCGVLWAIWQREGLPGYFKGLHAQILKTVLSSALLLMIKEKISATTWVLILAIRRLLLLPKGRLYVSSEERKSAGAGGRPKYRRHKMMSGKYTTIDDQNVSGSVPAVSDPGQVTVKFTDTNLQTFPPSVPSGKISGGSWPPRDTDGTFSNPVYGSDQSQQGGWIRAFTVAAYKPYFDIDTSDVLERIKESLFPFRGTFNEKIASNPDLYGPFWICTTLIFVAASIGTFVTYIAHKLKNKESSYDINLVTWAAGLFYGYVTIVPLCLYVILKYLSAPSSLVQLFCLYGYSIFVFIPALCMSIVPLETFRWAIAGVAGLMSATFVALNLRAHIESAGERWFLIVAGIFVLQLALAVVLKLYLFAVSV 617
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0133 617 Gene3D Mitochondrial carrier domain 3 298 IPR023395 -
Lele15g0133 617 ProSiteProfiles Solute carrier (Solcar) repeat profile. 202 297 IPR018108 -
Lele15g0133 617 Pfam Yip1 domain 448 607 IPR006977 GO:0016020
Lele15g0133 617 FunFam Peroxisomal adenine nucleotide carrier 1 3 298 - -
Lele15g0133 617 ProSiteProfiles Solute carrier (Solcar) repeat profile. 5 94 IPR018108 -
Lele15g0133 617 ProSiteProfiles Solute carrier (Solcar) repeat profile. 104 184 IPR018108 -
Lele15g0133 617 PANTHER PEROXISOMAL ADENINE NUCLEOTIDE TRANSPORTER 1 1 316 IPR045900 GO:0005347|GO:0006635|GO:0015217
Lele15g0133 617 Pfam Mitochondrial carrier protein 105 188 IPR018108 -
Lele15g0133 617 Pfam Mitochondrial carrier protein 204 295 IPR018108 -
Lele15g0133 617 Pfam Mitochondrial carrier protein 6 98 IPR018108 -
Lele15g0133 617 SUPERFAMILY Mitochondrial carrier 7 293 IPR023395 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele15g0133 Lele-ChrLele15 791843 797432 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0133 23 325 Chloroplast and Mitochondria Gene Families AT1G25380 26.087 1.38e-12 67.8
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2267 13 28790602 28795113 Lele15g0133 15 791843 797432 CCT
Lele14g2203 14 27134674 27137374 Lele15g0133 15 791843 797432 CCT
Lele15g0145 15 870825 875340 Lele15g0133 15 791843 797432 CCT
Lele15g0133 15 791843 797432 Lele13g2288 13 28902884 28906662 CCT
Lele15g0133 15 791843 797432 Lele15g0125 15 755441 759169 CCT
Lele15g0133 15 791843 797432 Lele15g0133 15 791843 797432 ECH
Lele13g2279 13 28867711 28873426 Lele15g0133 15 791843 797432 hybridization
Lele14g2214 14 27217885 27225146 Lele15g0133 15 791843 797432 hybridization